2VJ0
Crystal structure of the alpha-adaptin appendage domain, from the AP2 adaptor complex, in complex with an FXDNF peptide from amphiphysin1 and a WVXF peptide from synaptojanin P170
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2vj0a1 | All beta proteins | Immunoglobulin-like beta-sandwich | Clathrin adaptor appendage domain | Alpha-adaptin ear subdomain-like | Alpha-adaptin AP2 ear domain, N-terminal subdomain | MOUSE (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d2vj0a2 | Alpha and beta proteins (a+b) | Subdomain of clathrin and coatomer appendage domain | Subdomain of clathrin and coatomer appendage domain | Clathrin adaptor appendage, alpha and beta chain-specific domain | Alpa-adaptin AP2, C-terminal subdomain | MOUSE (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Alpha_adaptinC2 | e2vj0A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Alpha_adaptinC2 | ECOD (1.6) |
A | Alpha_adaptin_C | e2vj0A2 | A: a+b two layers | X: TBP-like | H: Subdomain of clathrin and coatomer appendage domain (From Topology) | T: Subdomain of clathrin and coatomer appendage domain | F: Alpha_adaptin_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1230 | Mainly Beta | Sandwich | Immunoglobulin-like | Gamma-adaptin ear (GAE) domain | CATH (4.3.0) |
A | 3.30.310.10 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | TATA-Binding Protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02296 | Alpha adaptin AP2, C-terminal domain (Alpha_adaptin_C) | Alpha adaptin AP2, C-terminal domain | - | Family | |
PF02883 | Adaptin C-terminal domain (Alpha_adaptinC2) | Adaptin C-terminal domain | Alpha adaptin is a heterotetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This ig-fold domain is found in alpha, beta and ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | All beta monotopic/peripheral | Immunoglobulin-like superfamily (E set) | Gamma-adaptin C-terminal appendage domain-like |