2DFS
3-D structure of Myosin-V inhibited state
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | P-loop motor domain | 8032926 | 3002036 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Myosin s1 fragment, N-terminal domain | 8032925 | 3000319 | SCOP2B (2022-06-29) |
H [auth M] | SCOP2B Superfamily | P-loop motor domain | 8032926 | 3002036 | SCOP2B (2022-06-29) |
H [auth M] | SCOP2B Superfamily | Myosin s1 fragment, N-terminal domain | 8032925 | 3000319 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Myosin_N_1 | e2dfsA2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N_1 | ECOD (1.6) |
A | IQ_1 | e2dfsA3 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: IQ_1 | ECOD (1.6) |
A | Myosin_head | e2dfsA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head | ECOD (1.6) |
H [auth M] | Myosin_N_1 | e2dfsM2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N_1 | ECOD (1.6) |
H [auth M] | IQ_1 | e2dfsM3 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: IQ_1 | ECOD (1.6) |
H [auth M] | Myosin_head | e2dfsM1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head | ECOD (1.6) |
C | EF-hand_7_8 | e2dfsC2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
C | EF-hand_7_5 | e2dfsC1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
D | EF-hand_7_8 | e2dfsD3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
D | EF-hand_7_5 | e2dfsD1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
E | EF-hand_7_8 | e2dfsE3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
E | EF-hand_7_5 | e2dfsE1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
F | EF-hand_7_8 | e2dfsF3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
F | EF-hand_7_5 | e2dfsF1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
G | EF-hand_7_8 | e2dfsG2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
G | EF-hand_7_5 | e2dfsG1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
J [auth O] | EF-hand_7_8 | e2dfsO2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
J [auth O] | EF-hand_7_5 | e2dfsO1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
K [auth P] | EF-hand_7_8 | e2dfsP3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
K [auth P] | EF-hand_7_5 | e2dfsP1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
L [auth Q] | EF-hand_7_8 | e2dfsQ3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
L [auth Q] | EF-hand_7_5 | e2dfsQ1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
N [auth S] | EF-hand_7_8 | e2dfsS2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
N [auth S] | EF-hand_7_5 | e2dfsS1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
B | EF-hand_7_8 | e2dfsB3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
B | EF-hand_7_5 | e2dfsB1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
I [auth N] | EF-hand_7_8 | e2dfsN3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
I [auth N] | EF-hand_7_5 | e2dfsN1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
M [auth R] | EF-hand_7_8 | e2dfsR3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
M [auth R] | EF-hand_7_5 | e2dfsR1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, H [auth M] | PF00612 | IQ calmodulin-binding motif (IQ) | IQ calmodulin-binding motif | - | Motif |
A, H [auth M] | PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, H [auth M] | IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily |
A, H [auth M] | IPR002710 | Dilute domain | Domain |
A, H [auth M] | IPR000048 | IQ motif, EF-hand binding site | Binding Site |
A, H [auth M] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
A, H [auth M] | IPR036103 | Class V myosin, motor domain | Domain |
A, H [auth M] | IPR037988 | Myosin 5a, cargo-binding domain | Domain |
A, H [auth M] | IPR001609 | Myosin head, motor domain | Domain |
A, H [auth M] | IPR004009 | Myosin, N-terminal, SH3-like | Domain |
IPR002048 | EF-hand domain | Domain | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR050145 | Calmodulin and Centrin Calcium-Binding Families | Family | |
IPR011992 | EF-hand domain pair | Homologous Superfamily |