2B8N
Crystal structure of Glycerate kinase (EC 2.7.1.31) (tm1585) from THERMOTOGA MARITIMA at 2.70 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2b8na_ | Alpha and beta proteins (a/b) | GckA/TtuD-like | GckA/TtuD-like | GckA/TtuD-like | Putative glycerate kinase (hypothetical protein TM1585) | (Thermotoga maritima MSB8 ) [TaxId: 243274 ], | SCOPe (2.08) |
B | d2b8nb_ | Alpha and beta proteins (a/b) | GckA/TtuD-like | GckA/TtuD-like | GckA/TtuD-like | Putative glycerate kinase (hypothetical protein TM1585) | (Thermotoga maritima MSB8 ) [TaxId: 243274 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05161 | e2b8nA2 | A: a+b two layers | X: Tetrapyrrole methylase C-terminal domain-like | H: GckA/TtuD-like domain 2 (From Topology) | T: GckA/TtuD-like domain 2 | F: PF05161 | ECOD (1.6) |
A | PF13660 | e2b8nA3 | A: a/b three-layered sandwiches | X: GckA/TtuD-like domain 1 (From Topology) | H: GckA/TtuD-like domain 1 (From Topology) | T: GckA/TtuD-like domain 1 | F: PF13660 | ECOD (1.6) |
B | PF05161 | e2b8nB2 | A: a+b two layers | X: Tetrapyrrole methylase C-terminal domain-like | H: GckA/TtuD-like domain 2 (From Topology) | T: GckA/TtuD-like domain 2 | F: PF05161 | ECOD (1.6) |
B | PF13660 | e2b8nB1 | A: a/b three-layered sandwiches | X: GckA/TtuD-like domain 1 (From Topology) | H: GckA/TtuD-like domain 1 (From Topology) | T: GckA/TtuD-like domain 1 | F: PF13660 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1480.10 | Alpha Beta | 3-Layer(aba) Sandwich | glycerate kinase, domain 1 | MOFRL domain | CATH (4.3.0) |
A | 3.40.50.10180 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Glycerate kinase, MOFRL-like N-terminal domain | CATH (4.3.0) |
B | 3.40.1480.10 | Alpha Beta | 3-Layer(aba) Sandwich | glycerate kinase, domain 1 | MOFRL domain | CATH (4.3.0) |
B | 3.40.50.10180 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Glycerate kinase, MOFRL-like N-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05161 | MOFRL family (MOFRL) | MOFRL family | - | Family | |
PF13660 | Domain of unknown function (DUF4147) (DUF4147) | Domain of unknown function (DUF4147) | This domain is frequently found at the N-terminus of proteins carrying the glycerate kinase-like domain MOFRL, Pfam:PF05161. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038614 | Glycerate kinase, N-terminal domain superfamily | Homologous Superfamily | |
IPR037035 | Glycerate kinase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR007835 | MOFRL domain | Domain | |
IPR025286 | MOFRL-associated domain | Domain | |
IPR039760 | MOFRL domain-containing protein | Family |