2B8N

Crystal structure of Glycerate kinase (EC 2.7.1.31) (tm1585) from THERMOTOGA MARITIMA at 2.70 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.53 Å
  • R-Value Free: 0.246 
  • R-Value Work: 0.182 
  • R-Value Observed: 0.185 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of a glycerate kinase (TM1585) from Thermotoga maritima at 2.70 A resolution reveals a new fold

Schwarzenbacher, R.McMullan, D.Krishna, S.S.Xu, Q.Miller, M.D.Canaves, J.M.Elsliger, M.A.Floyd, R.Grzechnik, S.K.Jaroszewski, L.Klock, H.E.Koesema, E.Kovarik, J.S.Kreusch, A.Kuhn, P.McPhillips, T.M.Morse, A.T.Quijano, K.Spraggon, G.Stevens, R.C.van den Bedem, H.Wolf, G.Hodgson, K.O.Wooley, J.Deacon, A.M.Godzik, A.Lesley, S.A.Wilson, I.A.

(2006) Proteins 65: 243-248


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
glycerate kinase, putativeA, B429Thermotoga maritima MSB8Mutation(s): 5 
Gene Names: tm1585TM_1585THEMA_06355Tmari_1593
EC: 2.7.1.31 (PDB Primary Data), 2.7.1.165 (UniProt)
UniProt
Find proteins for Q9X1S1 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
Explore Q9X1S1 
Go to UniProtKB:  Q9X1S1
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, BL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 61.954α = 90
b = 85.169β = 90
c = 172.507γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XSCALEdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
SHELXphasing
autoSHARPphasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-11-08
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Advisory, Source and taxonomy, Version format compliance