Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLigT-like 8037017 3001408 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLigT-like 8037017 3001408 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyLigT-like 8037017 3001408 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACPDasee1fsiA1 A: beta barrelsX: LigT-likeH: LigT-related (From Topology)T: LigT-relatedF: CPDaseECOD (1.6)
BCPDasee1fsiB1 A: beta barrelsX: LigT-likeH: LigT-related (From Topology)T: LigT-relatedF: CPDaseECOD (1.6)
CCPDasee1fsiC1 A: beta barrelsX: LigT-likeH: LigT-related (From Topology)T: LigT-relatedF: CPDaseECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.90.1140.10 Alpha Beta Alpha-Beta Complex Cyclic Phosphodiesterase Chain: A,CATH (4.3.0)
B3.90.1140.10 Alpha Beta Alpha-Beta Complex Cyclic Phosphodiesterase Chain: A,CATH (4.3.0)
C3.90.1140.10 Alpha Beta Alpha-Beta Complex Cyclic Phosphodiesterase Chain: A,CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF07823Cyclic phosphodiesterase-like protein (CPDase)Cyclic phosphodiesterase-like proteinCyclic phosphodiesterase (CPDase, Swiss:O04147) is involved in the tRNA splicing pathway. This protein exhibits a bilobal arrangement of two alpha-beta modules. Two antiparallel helices are found on the outer side of each lobe and frame an antiparall ...Cyclic phosphodiesterase (CPDase, Swiss:O04147) is involved in the tRNA splicing pathway. This protein exhibits a bilobal arrangement of two alpha-beta modules. Two antiparallel helices are found on the outer side of each lobe and frame an antiparallel beta-sheet that is wrapped around an accessible cleft. Moreover, the beta-strands of each lobe interact with the other lobe. The central water-filled cavity houses the enzyme's active site [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage