8OLM

Carbonic Anhydrase 2 in Complex with Steriod_Sulphamoyl AKI1


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.82911.6 M sodium citrate, 50 mM Tris-H2SO4
Crystal Properties
Matthews coefficientSolvent content
2.0740.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.13α = 90
b = 41.17β = 104.44
c = 72.33γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 200K2022-04-26MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU MICROMAX-0071.45187

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.55097.70.040.0460.999000000000000117.773.437856
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.540.482000000000000040.6490.573

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT1.531.9635968189497.70.183170.182390.19746RANDOM18.296
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.05-0.08-0.680.59
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.229
r_dihedral_angle_4_deg21.95
r_dihedral_angle_3_deg12.567
r_dihedral_angle_1_deg7.136
r_long_range_B_refined5.012
r_long_range_B_other4.901
r_scangle_other3.641
r_mcangle_other2.512
r_mcangle_it2.51
r_scbond_it2.39
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.229
r_dihedral_angle_4_deg21.95
r_dihedral_angle_3_deg12.567
r_dihedral_angle_1_deg7.136
r_long_range_B_refined5.012
r_long_range_B_other4.901
r_scangle_other3.641
r_mcangle_other2.512
r_mcangle_it2.51
r_scbond_it2.39
r_scbond_other2.39
r_angle_refined_deg1.805
r_mcbond_it1.665
r_mcbond_other1.653
r_angle_other_deg1.552
r_chiral_restr0.097
r_bond_refined_d0.012
r_gen_planes_refined0.011
r_bond_other_d0.004
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2048
Nucleic Acid Atoms
Solvent Atoms240
Heterogen Atoms26

Software

Software
Software NamePurpose
REFMACrefinement
XSCALEdata scaling
XDSdata reduction
MOLREPphasing