7CSQ

Solution structure of the complex between p75NTR-DD and TRADD-DD


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
22D 1H-13C HSQC aromatic0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
32D 1H-13C HSQC aliphatic0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
43D HNCA0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
53D HN(CO)CA0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
63D HCCH-TOCSY0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
74D 13C, 15N-edited NOESY0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
83D 13C, 15N-filtered NOESY0.2 mM [U-99% 13C; U-99% 15N] p75 neurotrophin receptor death domain, 2 mM [U-99% 13C; U-99% 15N] tumor necrosis factor receptor1-associated death domain protein50% H2O/50% D2O5.01 atm301Bruker AVANCE 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3structure calculationCYANAGuntert, Mumenthaler and Wuthrich
4data analysisNMRViewJohnson, One Moon Scientific
5chemical shift assignmentNMRViewJohnson, One Moon Scientific