2JQX

Solution structure of Malate Synthase G from joint refinement against NMR and SAXS data


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D TROSY-based NOESY0.17 mM [U-100% 15N], Ile CD1-[13CH3] MALATE SYNTHASE G, 20 mM sodium phosphate, 5 mM DTT, 150 mM sodium chloride100% H2O1707.1ambient293
24D TROSY-based NOESY0.17 mM [U-100% 15N], Ile CD1-[13CH3] MALATE SYNTHASE G, 20 mM sodium phosphate, 5 mM DTT, 150 mM sodium chloride100% H2O1707.1ambient293
33D TROSY-HNCO0.17 mM [U-100% 15N], Ile CD1-[13CH3] MALATE SYNTHASE G, 20 mM sodium phosphate, 5 mM DTT, 150 mM sodium chloride100% H2O1707.1ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing/Cartesian molecular dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriaclosest to the average
Conformers Calculated Total Number5
Conformers Submitted Total Number1
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsExperimental small-angle X-ray scattering data were acquired at the beam line 4-2, SSRL, using incident radiation at the 8 keV and 1.25 m sample-to-detector distance. One-dimensional gas position-sensitive detector was used for data collection. EXPERIMENTAL NMR DATA used for structure refinement are THE SAME AS IN THE PDB DEPOSITION 1Y8B (citation 1). SAXS intensities OVER THE RANGE Q = 0.028 TO 0.780 A-1 were FITTED BY A supplementary MODULE as described in citation 2.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNS1.0Brunger, Adams, Clore, Gros, Nilges and Read
2data reductionOTOKOKoch
3data processingPRIMUSSvergun