X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5277MES, zinc sulfate, PEG MME 550, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Crystal Properties
Matthews coefficientSolvent content
1.936.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 23.587α = 92.51
b = 23.569β = 96.85
c = 46.402γ = 119.63
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHmirrors2001-12-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SA0.9004SLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.22092.40.05613.13.74246942469413.8
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.21.2581.60.1317.12.922593

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.2202345723457123792.910.1620.1620.160.196RANDOM16.191
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.450.08-0.31-0.09-0.45-0.4
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.368
r_dihedral_angle_4_deg13.585
r_dihedral_angle_3_deg12.68
r_sphericity_free8.04
r_scangle_it6.195
r_scbond_it5.27
r_sphericity_bonded4.668
r_dihedral_angle_1_deg3.592
r_mcbond_it3.03
r_mcangle_it2.925
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.368
r_dihedral_angle_4_deg13.585
r_dihedral_angle_3_deg12.68
r_sphericity_free8.04
r_scangle_it6.195
r_scbond_it5.27
r_sphericity_bonded4.668
r_dihedral_angle_1_deg3.592
r_mcbond_it3.03
r_mcangle_it2.925
r_rigid_bond_restr2.309
r_angle_refined_deg1.541
r_mcbond_other1.26
r_angle_other_deg0.811
r_symmetry_vdw_refined0.377
r_symmetry_vdw_other0.305
r_nbd_refined0.253
r_metal_ion_refined0.211
r_symmetry_hbond_refined0.185
r_xyhbond_nbd_refined0.18
r_nbd_other0.17
r_chiral_restr0.09
r_nbtor_other0.089
r_bond_refined_d0.015
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms798
Nucleic Acid Atoms
Solvent Atoms98
Heterogen Atoms7

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
CNSphasing