1DJO

Crystal structure of Pseudomonas 7A Glutaminase-asparaginase with the inhibitor donv covalently bound in the active site

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Structure Motif: Primary M-CSA Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1djob_	Alpha and beta proteins (a/b)	Glutaminase/Asparaginase	Glutaminase/Asparaginase	Glutaminase/Asparaginase	Glutaminase-asparaginase	(Pseudomonas sp. 7A ) [TaxId: 65406 ],	SCOPe (2.08)
A	d1djoa_	Alpha and beta proteins (a/b)	Glutaminase/Asparaginase	Glutaminase/Asparaginase	Glutaminase/Asparaginase	Glutaminase-asparaginase	(Pseudomonas sp. 7A ) [TaxId: 65406 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Glutaminase/Asparaginase	8033213	3001625	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Glutaminase/Asparaginase	8033213	3001625	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PF17763	e1djoB3	A: a/b three-layered sandwiches	X: Glutaminase/Asparaginase C-terminal domain (From Topology)	H: Glutaminase/Asparaginase C-terminal domain (From Topology)	T: Glutaminase/Asparaginase C-terminal domain	F: PF17763	ECOD (1.6)
B	PF00710	e1djoB2	A: a/b three-layered sandwiches	X: Glutaminase/Asparaginase N-terminal domain (From Topology)	H: Glutaminase/Asparaginase N-terminal domain (From Topology)	T: Glutaminase/Asparaginase N-terminal domain	F: PF00710	ECOD (1.6)
A	PF17763	e1djoA3	A: a/b three-layered sandwiches	X: Glutaminase/Asparaginase C-terminal domain (From Topology)	H: Glutaminase/Asparaginase C-terminal domain (From Topology)	T: Glutaminase/Asparaginase C-terminal domain	F: PF17763	ECOD (1.6)
A	PF00710	e1djoA2	A: a/b three-layered sandwiches	X: Glutaminase/Asparaginase N-terminal domain (From Topology)	H: Glutaminase/Asparaginase N-terminal domain (From Topology)	T: Glutaminase/Asparaginase N-terminal domain	F: PF00710	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.1170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	L-asparaginase, N-terminal domain	CATH (4.3.0)
B	3.40.50.40	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
A	3.40.50.1170	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	L-asparaginase, N-terminal domain	CATH (4.3.0)
A	3.40.50.40	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00710	Asparaginase, N-terminal (Asparaginase)	Asparaginase, N-terminal	This is the N-terminal domain of this enzyme.	Domain
A, B	PF17763	Glutaminase/Asparaginase C-terminal domain (Asparaginase_C)	Glutaminase/Asparaginase C-terminal domain	This domain is found at the C-terminus of asparaginase enzymes.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	GLUTAMINASE-ASPARAGINASE	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds glutamin-(asparagin-)ase activity glutaminase activity asparaginase activity	organonitrogen compound metabolic process oxoacid metabolic process cellular metabolic process aspartate family amino acid metabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process organic acid metabolic process alpha-amino acid metabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process asparagine metabolic process organic substance metabolic process metabolic process organonitrogen compound metabolic process oxoacid metabolic process cellular metabolic process aspartate family amino acid metabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process organic acid metabolic process alpha-amino acid metabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process asparagine metabolic process organic substance metabolic process metabolic process small molecule metabolic process cellular process	periplasmic space cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR027473	L-asparaginase, C-terminal	Homologous Superfamily
A, B	IPR027475	Asparaginase/glutaminase, active site 2	Active Site
A, B	IPR036152	Asparaginase/glutaminase-like superfamily	Homologous Superfamily
A, B	IPR020827	Asparaginase/glutaminase, active site 1	Active Site
A, B	IPR037152	L-asparaginase, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR040919	Asparaginase/glutaminase, C-terminal	Domain
A, B	IPR027474	L-asparaginase, N-terminal	Domain
A, B	IPR004550	L-asparaginase, type II	Family
A, B	IPR006034	Asparaginase/glutaminase-like	Family

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

Chains	Enzyme Name	Description	Catalytic Residues
A, B	glutamin-(asparagin-)ase M-CSA #29	Glutaminase-asparaginase catalyses the hydrolysis of D and L isomers of glutamine and asparagine. Glutaminase-asparaginase belongs to a family of related amidohydrolases, in a less specific class that catalyses the hydrolysis of glutamine to glutamic acid and asparagine to aspartic acid with similar efficiency. They are mechanistically similar to trypsin.	Defined by 6 residues: THR:A-13 [auth A-1020]TYR:A-27 [auth A-1034]THR:A-93 [auth A-1100]ASP:A-94 [auth A-1101]LYS:A-166 [auth A-1173]GLU:B-287 [auth B-3294] \| Explore in 3D: M-CSA Motif Definition Search M-CSA Motif EC: 3.5.1.38 (PDB Primary Data) Search M-CSA Motif + EC 3.5.1.38

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.