AF_AFQ6AXN4F1

COMPUTED STRUCTURE MODEL OF NUCLEOPORIN NDC1

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain

  • AlphaFold DBQ6AXN4
  • Released in AlphaFold DB:  2021-07-01
    Last Modified in AlphaFold DB: 2025-08-01
  • Organism(s): Rattus norvegicus
  • UniProtKB: Q6AXN4

Model Confidence 

  • pLDDT (global): 75.76
  • pLDDT (local):
Model Confidence 
  •   Very high (pLDDT > 90)    
  •   Confident (70 < pLDDT ≤ 90)    
  •   Low (50 < pLDDT ≤ 70)    
  •   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Macromolecule Content 

  • Total Structure Weight: 75.78 kDa 
  • Atom Count: 5,341 
  • Modeled Residue Count: 673 
  • Deposited Residue Count: 673 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Nucleoporin NDC1673Rattus norvegicusMutation(s): 0 
Gene Names: Ndc1
UniProt
Find proteins for Q6AXN4 (Rattus norvegicus)
Explore Q6AXN4 
Go to UniProtKB:  Q6AXN4
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6AXN4
Sequence Annotations
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Reference Sequence