AF_AFB2JCI0F1

COMPUTED STRUCTURE MODEL OF PYRIDOXAL KINASE PDXY

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain

• AlphaFold DB: B2JCI0
• Released in AlphaFold DB:  2021-12-09
  Last Modified in AlphaFold DB: 2025-08-01
• Organism(s): Paraburkholderia phymatum STM815
• UniProtKB: B2JCI0

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Model Confidence 

• pLDDT (global): 95.82
• pLDDT (local):

Model Confidence 

•   Very high (pLDDT > 90)    
•   Confident (70 < pLDDT ≤ 90)    
•   Low (50 < pLDDT ≤ 70)    
•   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Macromolecule Content 

• Total Structure Weight: 31.62 kDa 
• Atom Count: 2,218 
• Modeled Residue Count: 287 
• Deposited Residue Count: 287 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Pyridoxal kinase PdxY	A	287	Paraburkholderia phymatum STM815	Mutation(s): 0  Gene Names: pdxY EC: 2.7.1.35
UniProt
Find proteins for B2JCI0 (Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)) Explore B2JCI0  Go to UniProtKB:  B2JCI0