AF_AFA6VFQ9F1

COMPUTED STRUCTURE MODEL OF DNA LIGASE

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain.

• AlphaFold DB: AF-A6VFQ9-F1
• Released in AlphaFold DB:  2021-12-09
  Last Modified in AlphaFold DB: 2022-09-30
• Organism(s): Methanococcus maripaludis C7
• UniProtKB: A6VFQ9

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Model Confidence 

• pLDDT (global): 92.81
• pLDDT (local):

Model Confidence 

•   Very high (pLDDT > 90)    
•   Confident (70 < pLDDT ≤ 90)    
•   Low (50 < pLDDT ≤ 70)    
•   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Macromolecule Content 

• Total Structure Weight: 65.9 kDa 
• Atom Count: 4,631 
• Modeled Residue Count: 573 
• Deposited Residue Count: 573 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA ligase	A	573	Methanococcus maripaludis C7	Mutation(s): 0  Gene Names: lig EC: 6.5.1.1
UniProt
Find proteins for A6VFQ9 (Methanococcus maripaludis (strain C7 / ATCC BAA-1331)) Explore A6VFQ9  Go to UniProtKB:  A6VFQ9