AF_AFA5UJB5F1

COMPUTED STRUCTURE MODEL OF UPF0280 PROTEIN MSM_0088

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain

• AlphaFold DB: A5UJB5
• Released in AlphaFold DB:  2021-12-09
  Last Modified in AlphaFold DB: 2025-08-01
• Organism(s): Methanobrevibacter smithii ATCC 35061
• UniProtKB: A5UJB5

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Model Confidence 

• pLDDT (global): 91.57
• pLDDT (local):

Model Confidence 

•   Very high (pLDDT > 90)    
•   Confident (70 < pLDDT ≤ 90)    
•   Low (50 < pLDDT ≤ 70)    
•   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Macromolecule Content 

• Total Structure Weight: 26.32 kDa 
• Atom Count: 1,843 
• Modeled Residue Count: 238 
• Deposited Residue Count: 238 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
UPF0280 protein Msm_0088	A	238	Methanobrevibacter smithii ATCC 35061	Mutation(s): 0  Gene Names: Msm_0088
UniProt
Find proteins for A5UJB5 (Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)) Explore A5UJB5  Go to UniProtKB:  A5UJB5