9IWU | pdb_00009iwu

CTB10-PE3.0-(R)-1g complex

PDB DOI: https://doi.org/10.2210/pdb9IWU/pdb

Classification: BIOSYNTHETIC PROTEIN
Organism(s): Cercospora sp. JNU001
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2024-07-26 Released: 2025-07-30
Deposition Author(s): Fu, K., Rao, Y.J.
Funding Organization(s): Other private

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free:
0.238 (Depositor), 0.237 (DCC)
R-Value Work:
0.182 (Depositor), 0.189 (DCC)
R-Value Observed:
0.185 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

Crystal structure of CTB10-PE3.0-(R)-1g

Fu, K., Rao, Y.J.

To be published.

Macromolecule Content

Total Structure Weight: 134.56 kDa
Atom Count: 8,715
Modeled Residue Count: 1,006
Deposited Residue Count: 1,128
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CTB10	A, B, C, D, E A, B, C, D, E, F, G, H	141	Cercospora sp. JNU001	Mutation(s): 2
UniProt
Find proteins for A0A977K7H6 (Cercospora sp. JNU001) Explore A0A977K7H6 Go to UniProtKB: A0A977K7H6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A977K7H6
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
A1EAB (Subject of Investigation/LOI) Query on A1EAB Download Ideal Coordinates CCD File SDF format, chain I [auth A] SDF format, chain K [auth C] SDF format, chain L [auth E] SDF format, chain N [auth F] SDF format, chain O [auth G] SDF format, chain R [auth H] MOL2 format, chain I [auth A] MOL2 format, chain K [auth C] MOL2 format, chain L [auth E] MOL2 format, chain N [auth F] MOL2 format, chain O [auth G] MOL2 format, chain R [auth H] mmCIF format, chain I [auth A] mmCIF format, chain K [auth C] mmCIF format, chain L [auth E] mmCIF format, chain N [auth F] mmCIF format, chain O [auth G] mmCIF format, chain R [auth H]	I [auth A] K [auth C] L [auth E] N [auth F] O [auth G] I [auth A], K [auth C], L [auth E], N [auth F], O [auth G], R [auth H]	2-[(3-cyanophenyl)methyl]-5,5-dimethyl-hexa-2,3-dienamide C₁₆ H₁₈ N₂ O OISKZRHWMMCOBF-ZETCQYMHSA-N		Interactions Focus chain I [auth A] Focus chain K [auth C] Focus chain L [auth E] Focus chain N [auth F] Focus chain O [auth G] Focus chain R [auth H] Interactions & Density Focus chain I [auth A] Focus chain K [auth C] Focus chain L [auth E] Focus chain N [auth F] Focus chain O [auth G] Focus chain R [auth H]
PEG Query on PEG Download Ideal Coordinates CCD File SDF format, chain J [auth B] MOL2 format, chain J [auth B] mmCIF format, chain J [auth B]	J [auth B]	DI(HYDROXYETHYL)ETHER C₄ H₁₀ O₃ MTHSVFCYNBDYFN-UHFFFAOYSA-N		Interactions Focus chain J [auth B] Interactions & Density Focus chain J [auth B]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain M [auth F] SDF format, chain P [auth H] SDF format, chain Q [auth H] MOL2 format, chain M [auth F] MOL2 format, chain P [auth H] MOL2 format, chain Q [auth H] mmCIF format, chain M [auth F] mmCIF format, chain P [auth H] mmCIF format, chain Q [auth H]	M [auth F], P [auth H], Q [auth H]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain M [auth F] Focus chain P [auth H] Focus chain Q [auth H] Interactions & Density Focus chain M [auth F] Focus chain P [auth H] Focus chain Q [auth H]