9H1Z | pdb_00009h1z

Cryo-EM Structure of human OAS2 Dimer


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural basis for OAS2 regulation and its antiviral function.

Merold, V.Bekere, I.Kretschmer, S.Schnell, A.F.Kmiec, D.Sivarajan, R.Lammens, K.Liu, R.Mergner, J.Teppert, J.Hirschenberger, M.Henrici, A.Hammes, S.Buder, K.Weitz, M.Hackmann, K.Koenig, L.M.Pichlmair, A.Schwierz, N.Sparrer, K.M.J.Lee-Kirsch, M.A.de Oliveira Mann, C.C.

(2025) Mol Cell 85: 2176-2193.e13

  • DOI: https://doi.org/10.1016/j.molcel.2025.05.001
  • Primary Citation of Related Structures:  
    9H1Z

  • PubMed Abstract: 

    Oligoadenylate synthetase (OAS) proteins are immune sensors for double-stranded RNA and are critical for restricting viruses. OAS2 comprises two OAS domains, only one of which can synthesize 2'-5'-oligoadenylates for RNase L activation. Existing structures of OAS1 provide a model for enzyme activation, but they do not explain how multiple OAS domains discriminate RNA length. Here, we discover that human OAS2 exists in an auto-inhibited state as a zinc-mediated dimer and present a mechanism for RNA length discrimination: the catalytically deficient domain acts as a molecular ruler that prevents autoreactivity to short RNAs. We demonstrate that dimerization and myristoylation localize OAS2 to Golgi membranes and that this is required for OAS2 activation and the restriction of viruses that exploit the endomembrane system for replication, e.g., coronaviruses. Finally, our results highlight the non-redundant role of OAS proteins and emphasize the clinical relevance of OAS2 by identifying a patient with a loss-of-function mutation associated with autoimmune disease.


  • Organizational Affiliation
    • Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich, Garching 85748, Germany.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
2'-5'-oligoadenylate synthase 2
A, B
739Homo sapiensMutation(s): 0 
Gene Names: OAS2
EC: 2.7.7.84
UniProt & NIH Common Fund Data Resources
Find proteins for P29728 (Homo sapiens)
Explore P29728 
Go to UniProtKB:  P29728
PHAROS:  P29728
GTEx:  ENSG00000111335 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP29728
Sequence Annotations
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)Germany369799452
German Research Foundation (DFG)Germany458004906
European Research Council (ERC)European Union101117085

Revision History  (Full details and data files)

  • Version 1.0: 2025-05-28
    Type: Initial release
  • Version 1.1: 2025-06-04
    Changes: Data collection, Database references
  • Version 1.2: 2025-06-18
    Changes: Data collection, Database references