9E6O | pdb_00009e6o

Structure of a Mouse KC Filament

PDB DOI: https://doi.org/10.2210/pdb9E6O/pdb

Classification: CYTOKINE
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2024-10-30 Released: 2025-11-12
Deposition Author(s): White, M.A., Sepuru, K.M., Rajarathnam, K.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.60 Å
R-Value Free:
0.303 (Depositor), 0.303 (DCC)
R-Value Work:
0.286 (Depositor), 0.283 (DCC)
R-Value Observed:
0.287 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Structure of a Mouse KC dimeric mutant

White, M.A., Sepuru, K.M., Rajarathnam, K.

To be published.

Macromolecule Content

Total Structure Weight: 110.62 kDa
Atom Count: 6,691
Modeled Residue Count: 912
Deposited Residue Count: 1,022
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Growth-regulated alpha protein	A [auth B] B [auth A] C D E A [auth B], B [auth A], C, D, E, F, G, H, I, J, K, L, M, N	73	Mus musculus	Mutation(s): 1 Gene Names: Cxcl1, Gro, Gro1, Mgsa, Scyb1
UniProt & NIH Common Fund Data Resources
Find proteins for P12850 (Mus musculus) Explore P12850 Go to UniProtKB: P12850
IMPC: MGI:108068
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P12850
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
NO3 Query on NO3 Download Ideal Coordinates CCD File SDF format, chain X [auth M] SDF format, chain W [auth L] SDF format, chain V [auth J] SDF format, chain U [auth I] SDF format, chain T [auth F] SDF format, chain S [auth E] SDF format, chain R [auth D] SDF format, chain Q [auth C] SDF format, chain P [auth A] SDF format, chain O [auth B] MOL2 format, chain X [auth M] MOL2 format, chain W [auth L] MOL2 format, chain V [auth J] MOL2 format, chain U [auth I] MOL2 format, chain T [auth F] MOL2 format, chain S [auth E] MOL2 format, chain R [auth D] MOL2 format, chain Q [auth C] MOL2 format, chain P [auth A] MOL2 format, chain O [auth B] mmCIF format, chain X [auth M] mmCIF format, chain W [auth L] mmCIF format, chain V [auth J] mmCIF format, chain U [auth I] mmCIF format, chain T [auth F] mmCIF format, chain S [auth E] mmCIF format, chain R [auth D] mmCIF format, chain Q [auth C] mmCIF format, chain P [auth A] mmCIF format, chain O [auth B]	O [auth B] P [auth A] Q [auth C] R [auth D] S [auth E] O [auth B], P [auth A], Q [auth C], R [auth D], S [auth E], T [auth F], U [auth I], V [auth J], W [auth L], X [auth M]	NITRATE ION N O₃ NHNBFGGVMKEFGY-UHFFFAOYSA-N		Interactions Focus chain O [auth B] Focus chain P [auth A] Focus chain Q [auth C] Focus chain R [auth D] Focus chain S [auth E] Focus chain T [auth F] Focus chain U [auth I] Focus chain V [auth J] Focus chain W [auth L] Focus chain X [auth M] Interactions & Density Focus chain O [auth B] Focus chain P [auth A] Focus chain Q [auth C] Focus chain R [auth D] Focus chain S [auth E] Focus chain T [auth F] Focus chain U [auth I] Focus chain V [auth J] Focus chain W [auth L] Focus chain X [auth M]