9PV2 | pdb_00009pv2

Structure of S. aureus GpsB N-terminal domain

PDB DOI: https://doi.org/10.2210/pdb9PV2/pdb

Classification: CELL CYCLE
Organism(s): Staphylococcus aureus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2025-07-31 Released: 2025-10-01
Deposition Author(s): Nicely, N.I., Baker, R.W., Bartlett, T.M.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.75 Å
R-Value Free:
0.236 (Depositor), 0.236 (DCC)
R-Value Work:
0.198 (Depositor), 0.198 (DCC)
R-Value Observed:
0.201 (Depositor)

Starting Model: experimental
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This is version 1.0 of the entry. See complete history.

Literature

Structure of S. aureus GpsB N-terminal domain

Nicely, N.I., Baker, R.W., Bartlett, T.M.

To be published.

Macromolecule Content

Total Structure Weight: 17.74 kDa
Atom Count: 1,369
Modeled Residue Count: 146
Deposited Residue Count: 150
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell cycle protein GpsB	A, B	75	Staphylococcus aureus	Mutation(s): 0 Gene Names: gpsB, SAOUHSC_01462
UniProt
Find proteins for Q2FYI5 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FYI5 Go to UniProtKB: Q2FYI5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q2FYI5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.75 Å
R-Value Free: 0.236 (Depositor), 0.236 (DCC)
R-Value Work: 0.198 (Depositor), 0.198 (DCC)
R-Value Observed: 0.201 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 38.373	α = 90
b = 55.531	β = 90
c = 77.077	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
SCALA	data scaling
PHASER	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2025-10-01

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2025-10-01
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.