9ODX | pdb_00009odx

Structure of Unc119B in complex with N-acetyl-S-geranylgeranyl-L-Cysteine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 
    0.194 (Depositor), 0.196 (DCC) 
  • R-Value Work: 
    0.157 (Depositor), 0.166 (DCC) 
  • R-Value Observed: 
    0.159 (Depositor) 

Starting Model: experimental
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Literature

Inhibition of Unc119b improves insulin sensitivity through potentiation of Rac1 activation in skeletal muscle and brown adipose tissue.

Mittal, A.Buscaglia, P.Srivastava, D.Artemyev, N.O.Sebag, J.A.

(2025) Mol Metab 100: 102230-102230

  • DOI: https://doi.org/10.1016/j.molmet.2025.102230
  • Primary Citation of Related Structures:  
    9NEM, 9ODX

  • PubMed Abstract: 

    A hallmark of type II diabetes is an impairment of the glucose transporter GLUT4 translocation to the plasma membrane of specialized cells in response to insulin. Identifying mechanisms involved in this defect is critical to developing treatments that restore insulin sensitivity. We previously identified a small molecule insulin sensitizer, C59, which improves insulin-stimulated GLUT4 translocation through binding to Unc119b, however, the role and mechanism of Unc119b-mediated regulation of GLUT4 trafficking is unknown. Here we use in vitro systems and rodent models of insulin resistance with genetic manipulations of Unc119b expression to uncover the role of this protein in the regulation of glucose homeostasis. We demonstrate that Unc119b is an endogenous inhibitor of GLUT4 translocation which contributes to the development of insulin resistance in obese individuals. We show that Unc119b interacts with Rac1 and inhibits its activation by insulin, resulting in reduced GLUT4 translocation. Both the prenylated C-terminus of Rac1 and C59 bind to the same site within Unc119b, thus suggesting that C59 enhances GLUT4 translocation by interfering with the action of Unc119b on Rac1. Overall, this study identifies Unc119b as a critical regulator of glucose homeostasis, uncovers its role in GLUT4 trafficking, and identifies the mechanism of action of a new class of insulin sensitizers.


  • Organizational Affiliation
    • Department of Pharmacology, University of Michigan, Ann Arbor, MI, 48109, USA; Elizabeth Weiser Caswell Diabetes Institute, University of Michigan, Ann Arbor, MI, 48109, USA; Department of Molecular Physiology and Biophysics, University of Iowa, Iowa city, 52242, USA.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Protein unc-119 homolog B221Mus musculusMutation(s): 0 
Gene Names: Unc119b
UniProt & NIH Common Fund Data Resources
Find proteins for Q8C4B4 (Mus musculus)
Explore Q8C4B4 
Go to UniProtKB:  Q8C4B4
IMPC:  MGI:2147162
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8C4B4
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free:  0.194 (Depositor), 0.196 (DCC) 
  • R-Value Work:  0.157 (Depositor), 0.166 (DCC) 
  • R-Value Observed: 0.159 (Depositor) 
Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 80.67α = 90
b = 62.641β = 117.743
c = 51.872γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Other privateUnited States--

Revision History  (Full details and data files)

  • Version 1.0: 2025-09-03
    Type: Initial release