9MT4 | pdb_00009mt4

Connector structure of phage JohannRWettstein (Bas63)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Cryo-EM structure of bacteriophage Bas63 reveals structural conservation and diversity in the Felixounavirus genus.

Hodgkinson-Bean, J.Ayala, R.McJarrow-Keller, K.Cassin, L.Rutter, G.L.Crowe, A.J.M.Wolf, M.Bostina, M.

(2025) Sci Adv 11: eadx0790-eadx0790

  • DOI: https://doi.org/10.1126/sciadv.adx0790
  • Primary Citation of Related Structures:  
    9MT4, 9MT5

  • PubMed Abstract: 

    The BASEL phage collection was developed to provide access to diverse bacteriophages, distinct from model phages. Escherichia phage JohannRWettstein (Bas63), a myophage in the collection, is a member of the subfamily Ounavirinae and the Felixounavirus genus. Using cryo-electron microscopy, we investigated Bas63's structure to explore its evolutionary relationships and functional adaptations. Our structures reveal a series of gene products: (i) a capsid decorated with β-tulip proteins at three-fold symmetry axes and a Hoc-like protein at hexamer centers, (ii) a conserved connector with an additional 12-fold ring of collar proteins that extend unique whisker proteins that are structurally related to podophage GP4 tail fibers, and (iii) a baseplate with long tail fibers resembling a contracted form of T4's long tail fibers. Sequence conservation analysis of Bas63 structural proteins across ICTV-recognized Felixounavirus' supports its role as a structural model for Felixounavirus evolution. This study advances the mechanistic understanding of phage architecture and reinforces the structural mosaicism of bacteriophages.


  • Organizational Affiliation
    • Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Portal proteinA [auth B],
B [auth A]
488Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE7VVG7 (Escherichia phage JohannRWettstein)
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Go to UniProtKB:  A0AAE7VVG7
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UniProt GroupA0AAE7VVG7
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Head-closure proteinC [auth E]133Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE7VV34 (Escherichia phage JohannRWettstein)
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UniProt GroupA0AAE7VV34
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Tail terminator proteinD [auth F]199Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE7VUU6 (Escherichia phage JohannRWettstein)
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UniProt GroupA0AAE7VUU6
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Tube proteinE [auth P],
F [auth O]
148Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE7VV62 (Escherichia phage JohannRWettstein)
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UniProt GroupA0AAE7VV62
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Phage protein110Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE7VWD1 (Escherichia phage JohannRWettstein)
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UniProt GroupA0AAE7VWD1
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Structural proteinM [auth Q],
N [auth R]
450Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE7VVP5 (Escherichia phage JohannRWettstein)
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UniProt GroupA0AAE7VVP5
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Phage proteinO [auth C],
P [auth D]
149Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE8B2G2 (Escherichia phage JohannRWettstein)
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UniProt GroupA0AAE8B2G2
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Collar proteinQ [auth G],
R [auth H]
166Escherichia phage JohannRWettsteinMutation(s): 0 
UniProt
Find proteins for A0AAE7VUQ8 (Escherichia phage JohannRWettstein)
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UniProt GroupA0AAE7VUQ8
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Agriculture, Forestry and Fisheries (MAFF)JapanGD0696J004
Japan Society for the Promotion of Science (JSPS)Japan21K20645

Revision History  (Full details and data files)

  • Version 1.0: 2025-11-19
    Type: Initial release
  • Version 1.1: 2025-11-26
    Changes: Data collection, Database references