9MJG | pdb_00009mjg

Crystal structure of HAT1 in complex with XS380871

PDB DOI: https://doi.org/10.2210/pdb9MJG/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2024-12-15 Released: 2025-02-05
Deposition Author(s): Zeng, H., Li, F., Wang, X., Sun, J., Dong, A., Peng, H., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
Funding Organization(s): Other private

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.58 Å
R-Value Free:
0.270 (Depositor), 0.271 (DCC)
R-Value Work:
0.235 (Depositor), 0.236 (DCC)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

Crystal structure of HAT1 in complex with XS380871

Zeng, H., Li, F., Wang, X., Sun, J., Dong, A., Peng, H., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)

To be published.

Macromolecule Content

Total Structure Weight: 306.12 kDa
Atom Count: 20,479
Modeled Residue Count: 2,512
Deposited Residue Count: 2,576
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Histone acetyltransferase type B catalytic subunit	A, B, C, D, E A, B, C, D, E, F, G, H	322	Homo sapiens	Mutation(s): 0 Gene Names: HAT1, hCG_16790 EC: 2.3.1.48
UniProt & NIH Common Fund Data Resources
Find proteins for O14929 (Homo sapiens) Explore O14929 Go to UniProtKB: O14929
PHAROS: O14929 GTEx: ENSG00000128708
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O14929
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
A1BLX (Subject of Investigation/LOI) Query on A1BLX Download Ideal Coordinates CCD File SDF format, chain I [auth A] SDF format, chain J [auth B] SDF format, chain K [auth C] SDF format, chain L [auth D] SDF format, chain M [auth E] SDF format, chain N [auth F] SDF format, chain P [auth H] SDF format, chain O [auth G] MOL2 format, chain I [auth A] MOL2 format, chain J [auth B] MOL2 format, chain K [auth C] MOL2 format, chain L [auth D] MOL2 format, chain M [auth E] MOL2 format, chain N [auth F] MOL2 format, chain P [auth H] MOL2 format, chain O [auth G] mmCIF format, chain I [auth A] mmCIF format, chain J [auth B] mmCIF format, chain K [auth C] mmCIF format, chain L [auth D] mmCIF format, chain M [auth E] mmCIF format, chain N [auth F] mmCIF format, chain P [auth H] mmCIF format, chain O [auth G]	I [auth A] J [auth B] K [auth C] L [auth D] M [auth E] I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], N [auth F], O [auth G], P [auth H]	(4S,7R)-4-(3-ethoxy-4-hydroxy-5-nitrophenyl)-7-(4-fluorophenyl)-4,6,7,8-tetrahydroquinoline-2,5(1H,3H)-dione C₂₃ H₂₁ F N₂ O₆ ZIQMAORRANWURA-CJNGLKHVSA-N		Interactions Focus chain I [auth A] Focus chain J [auth B] Focus chain K [auth C] Focus chain L [auth D] Focus chain M [auth E] Focus chain N [auth F] Focus chain O [auth G] Focus chain P [auth H] Interactions & Density Focus chain I [auth A] Focus chain J [auth B] Focus chain K [auth C] Focus chain L [auth D] Focus chain M [auth E] Focus chain N [auth F] Focus chain O [auth G] Focus chain P [auth H]