9L79 | pdb_00009l79

Structure of GPR119-Gs complex bound to AR231453

• PDB DOI: https://doi.org/10.2210/pdb9L79/pdb
• EM Map EMD-62871: EMDB EMDataResource

• Classification: MEMBRANE PROTEIN
• Organism(s): Homo sapiens, Rattus norvegicus, Bos taurus, Mus musculus, Lama glama
• Expression System: Homo sapiens, Trichoplusia ni, Trichoplusia, Escherichia coli
• Mutation(s): Yes 


• Deposited: 2024-12-26 Released: 2025-12-31 
• Deposition Author(s): Sun, Q., He, G., Xu, X., Liu, X.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.98 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Structure of GPR119-Gs complex bound to AR231453

Sun, Q., He, G., Xu, X., Liu, X.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 6-mer - A1B1C1D1E1F1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 157.71 kDa 
• Atom Count: 9,461 
• Modeled Residue Count: 1,243 
• Deposited Residue Count: 1,420 
• Unique protein chains: 6

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glucose-dependent insulinotropic receptor	A [auth R]	359	Homo sapiens	Mutation(s): 0  Gene Names: GPR119
UniProt & NIH Common Fund Data Resources
Find proteins for Q8TDV5 (Homo sapiens) Explore Q8TDV5  Go to UniProtKB:  Q8TDV5
PHAROS:  Q8TDV5 GTEx:  ENSG00000147262

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	B	351	Rattus norvegicus	Mutation(s): 0  Gene Names: Gnb1
UniProt
Find proteins for P54311 (Rattus norvegicus) Explore P54311  Go to UniProtKB:  P54311

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2	C [auth G]	68	Bos taurus	Mutation(s): 0  Gene Names: GNG2
UniProt
Find proteins for P63212 (Bos taurus) Explore P63212  Go to UniProtKB:  P63212

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short	D [auth A]	245	Homo sapiens	Mutation(s): 5  Gene Names: GNAS, GNAS1, GSP EC: 3.6.5
UniProt & NIH Common Fund Data Resources
Find proteins for P63092 (Homo sapiens) Explore P63092  Go to UniProtKB:  P63092
PHAROS:  P63092 GTEx:  ENSG00000087460

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
scFv16	E [auth S]	259	Mus musculus	Mutation(s): 0

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
NB35	F [auth N]	138	Lama glama	Mutation(s): 0

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
8WL (Subject of Investigation/LOI)	G [auth R]	N-(2-fluoranyl-4-methylsulfonyl-phenyl)-5-nitro-6-[4-(3-propan-2-yl-1,2,4-oxadiazol-5-yl)piperidin-1-yl]pyrimidin-4-amine C21 H24 F N7 O5 S DGBKNTVAKIFYNU-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.98 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-12-31 
Deposition Author(s): Sun, Q., He, G., Xu, X., Liu, X.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32122041
National Natural Science Foundation of China (NSFC)	China	32100968

Revision History  

• Version 1.0: 2025-12-31
  Type: Initial release