9J46 | pdb_00009j46

Crystal structure of ASFV E146L

• PDB DOI: https://doi.org/10.2210/pdb9J46/pdb

• Classification: VIRAL PROTEIN
• Organism(s): African swine fever virus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2024-08-09 Released: 2025-01-01 
• Deposition Author(s): Guo, Y.L., Wang, Z.X.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.06 Å
• R-Value Free: 
  0.252 (Depositor), 0.252 (DCC) 
• R-Value Work: 
  0.212 (Depositor), 0.212 (DCC) 
• R-Value Observed: 
  0.214 (Depositor) 

Starting Model: in silico

Literature

Crystal structure of ASFV E146L

Guo, Y.L., Wang, Z.X.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 84.53 kDa 
• Atom Count: 5,770 
• Modeled Residue Count: 708 
• Deposited Residue Count: 756 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
E146L	A [auth F], B [auth A], C [auth D], D [auth E], E [auth C], F [auth B]	126	African swine fever virus	Mutation(s): 0  Gene Names: E146L CDS, E146L, ASFV-Georgia_4-152, ASFV_Kyiv_2016_131_00205
UniProt
Find proteins for A0A2X0S7E9 (African swine fever virus) Explore A0A2X0S7E9  Go to UniProtKB:  A0A2X0S7E9

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.06 Å
• R-Value Free:  0.252 (Depositor), 0.252 (DCC) 
• R-Value Work:  0.212 (Depositor), 0.212 (DCC) 
• R-Value Observed: 0.214 (Depositor) 

Space Group: P 6₅ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 75.933	α = 90
b = 75.933	β = 90
c = 570.224	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data scaling
PHENIX	phasing
HKL-2000	data reduction

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-01-01 
Deposition Author(s): Guo, Y.L., Wang, Z.X.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2025-01-01
  Type: Initial release