9IVF | pdb_00009ivf

Deposited: 2024-07-23 Released: 2025-12-24
Deposition Author(s): Xu, K.E., Chen, Y.T.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Xu, K.E., Chen, Y.T.

To be published.

Macromolecule Content

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative primase C962R	A, B, C, D, E A, B, C, D, E, F	962	African swine fever virus	Mutation(s): 0 Gene Names: C962R CDS, C962R, ASFV-Georgia_4-095
UniProt
Find proteins for A0A2X0TKI6 (African swine fever virus) Explore A0A2X0TKI6 Go to UniProtKB: A0A2X0TKI6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A2X0TKI6
Sequence Annotations Expand
Reference Sequence

Find similar nucleic acids by: Sequence | 3D Structure

Entity ID: 2
Molecule	Chains	Length	Organism	Image
DNA (5'-D(PTPTPTPTPTPTPTPT)-3')	G	8	synthetic construct
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ANP (Subject of Investigation/LOI) Query on ANP Download Ideal Coordinates CCD File SDF format, chain H [auth A] SDF format, chain I [auth C] SDF format, chain K [auth D] SDF format, chain L [auth E] SDF format, chain M [auth F] SDF format, chain J [auth C] MOL2 format, chain H [auth A] MOL2 format, chain I [auth C] MOL2 format, chain K [auth D] MOL2 format, chain L [auth E] MOL2 format, chain M [auth F] MOL2 format, chain J [auth C] mmCIF format, chain H [auth A] mmCIF format, chain I [auth C] mmCIF format, chain K [auth D] mmCIF format, chain L [auth E] mmCIF format, chain M [auth F] mmCIF format, chain J [auth C]	H [auth A] I [auth C] J [auth C] K [auth D] L [auth E] H [auth A], I [auth C], J [auth C], K [auth D], L [auth E], M [auth F]	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C₁₀ H₁₇ N₆ O₁₂ P₃ PVKSNHVPLWYQGJ-KQYNXXCUSA-N		Interactions Focus chain H [auth A] Focus chain I [auth C] Focus chain J [auth C] Focus chain K [auth D] Focus chain L [auth E] Focus chain M [auth F] Interactions & Density Focus chain H [auth A] Focus chain I [auth C] Focus chain J [auth C] Focus chain K [auth D] Focus chain L [auth E] Focus chain M [auth F]