9IUE | pdb_00009iue

cryo-EM structure of FtsE/X and ZipA complex in filament

PDB DOI: https://doi.org/10.2210/pdb9IUE/pdb
EM Map EMD-60898: EMDB EMDataResource

Classification: CELL CYCLE
Organism(s): Escherichia coli str. K-12 substr. MG1655
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2024-07-20 Released: 2025-07-23
Deposition Author(s): Zhu, K.F., Li, J.W., Luo, M.
Funding Organization(s): National Research Foundation (NRF, Singapore)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

cryo-EM structure of FtsE/X and ZipA complex in filament

Zhu, K.F., Li, J.W., Luo, M.

To be published.

Macromolecule Content

Total Structure Weight: 1,808.22 kDa
Atom Count: 75,492
Modeled Residue Count: 9,846
Deposited Residue Count: 16,308
Unique protein chains: 3

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division protein ZipA	A [auth 1] AA [auth W] B [auth 2] BA [auth X] GA [auth c] A [auth 1], AA [auth W], B [auth 2], BA [auth X], GA [auth c], HA [auth d], I [auth E], J [auth F], MA [auth i], NA [auth j], O [auth K], P [auth L], SA [auth o], TA [auth p], U [auth Q], V [auth R], YA [auth u], ZA [auth v]	328	Escherichia coli str. K-12 substr. MG1655	Mutation(s): 0 Gene Names: zipA, b2412, JW2404
UniProt
Find proteins for P77173 (Escherichia coli (strain K12)) Explore P77173 Go to UniProtKB: P77173
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P77173
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division ATP-binding protein FtsE	AB [auth w] BB [auth x] C [auth 5] CA [auth Y] D [auth 6] AB [auth w], BB [auth x], C [auth 5], CA [auth Y], D [auth 6], DA [auth Z], IA [auth e], JA [auth f], K [auth G], L [auth H], OA [auth k], PA [auth l], Q [auth M], R [auth N], UA [auth q], VA [auth r], W [auth S], X [auth T]	226	Escherichia coli str. K-12 substr. MG1655	Mutation(s): 0 Gene Names: ftsE
UniProt
Find proteins for P0A9R7 (Escherichia coli (strain K12)) Explore P0A9R7 Go to UniProtKB: P0A9R7
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0A9R7
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division protein FtsX	E [auth A] EA [auth a] F [auth B] FA [auth b] G [auth C] E [auth A], EA [auth a], F [auth B], FA [auth b], G [auth C], H [auth D], KA [auth g], LA [auth h], M [auth I], N [auth J], QA [auth m], RA [auth n], S [auth O], T [auth P], WA [auth s], XA [auth t], Y [auth U], Z [auth V]	352	Escherichia coli str. K-12 substr. MG1655	Mutation(s): 0 Gene Names: ftsX, ftsS, b3462, JW3427
UniProt
Find proteins for P0AC30 (Escherichia coli (strain K12)) Explore P0AC30 Go to UniProtKB: P0AC30
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0AC30
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
AGS (Subject of Investigation/LOI) Query on AGS Download Ideal Coordinates CCD File SDF format, chain DB [auth 6] SDF format, chain JB [auth T] SDF format, chain MB [auth e] SDF format, chain TB [auth x] SDF format, chain SB [auth w] SDF format, chain RB [auth r] SDF format, chain QB [auth q] SDF format, chain PB [auth l] SDF format, chain OB [auth k] SDF format, chain NB [auth f] SDF format, chain LB [auth Z] SDF format, chain KB [auth Y] SDF format, chain IB [auth S] SDF format, chain HB [auth N] SDF format, chain GB [auth M] SDF format, chain FB [auth H] SDF format, chain EB [auth G] SDF format, chain CB [auth 5] MOL2 format, chain DB [auth 6] MOL2 format, chain JB [auth T] MOL2 format, chain MB [auth e] MOL2 format, chain TB [auth x] MOL2 format, chain SB [auth w] MOL2 format, chain RB [auth r] MOL2 format, chain QB [auth q] MOL2 format, chain PB [auth l] MOL2 format, chain OB [auth k] MOL2 format, chain NB [auth f] MOL2 format, chain LB [auth Z] MOL2 format, chain KB [auth Y] MOL2 format, chain IB [auth S] MOL2 format, chain HB [auth N] MOL2 format, chain GB [auth M] MOL2 format, chain FB [auth H] MOL2 format, chain EB [auth G] MOL2 format, chain CB [auth 5] mmCIF format, chain DB [auth 6] mmCIF format, chain JB [auth T] mmCIF format, chain MB [auth e] mmCIF format, chain TB [auth x] mmCIF format, chain SB [auth w] mmCIF format, chain RB [auth r] mmCIF format, chain QB [auth q] mmCIF format, chain PB [auth l] mmCIF format, chain OB [auth k] mmCIF format, chain NB [auth f] mmCIF format, chain LB [auth Z] mmCIF format, chain KB [auth Y] mmCIF format, chain IB [auth S] mmCIF format, chain HB [auth N] mmCIF format, chain GB [auth M] mmCIF format, chain FB [auth H] mmCIF format, chain EB [auth G] mmCIF format, chain CB [auth 5]	CB [auth 5] DB [auth 6] EB [auth G] FB [auth H] GB [auth M] CB [auth 5], DB [auth 6], EB [auth G], FB [auth H], GB [auth M], HB [auth N], IB [auth S], JB [auth T], KB [auth Y], LB [auth Z], MB [auth e], NB [auth f], OB [auth k], PB [auth l], QB [auth q], RB [auth r], SB [auth w], TB [auth x]	PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER C₁₀ H₁₆ N₅ O₁₂ P₃ S NLTUCYMLOPLUHL-KQYNXXCUSA-N		Interactions Focus chain CB [auth 5] Focus chain DB [auth 6] Focus chain EB [auth G] Focus chain FB [auth H] Focus chain GB [auth M] Focus chain HB [auth N] Focus chain IB [auth S] Focus chain JB [auth T] Focus chain KB [auth Y] Focus chain LB [auth Z] Focus chain MB [auth e] Focus chain NB [auth f] Focus chain OB [auth k] Focus chain PB [auth l] Focus chain QB [auth q] Focus chain RB [auth r] Focus chain SB [auth w] Focus chain TB [auth x] Interactions & Density Focus chain CB [auth 5] Focus chain DB [auth 6] Focus chain EB [auth G] Focus chain FB [auth H] Focus chain GB [auth M] Focus chain HB [auth N] Focus chain IB [auth S] Focus chain JB [auth T] Focus chain KB [auth Y] Focus chain LB [auth Z] Focus chain MB [auth e] Focus chain NB [auth f] Focus chain OB [auth k] Focus chain PB [auth l] Focus chain QB [auth q] Focus chain RB [auth r] Focus chain SB [auth w] Focus chain TB [auth x]