9I3E | pdb_00009i3e

CP of RHDV mutant - 29N

• PDB DOI: https://doi.org/10.2210/pdb9I3E/pdb
• EM Map EMD-52588: EMDB EMDataResource

• Classification: VIRUS LIKE PARTICLE
• Organism(s): Rabbit hemorrhagic disease virus
• Expression System: Trichoplusia ni
• Mutation(s): No 


• Deposited: 2025-01-22 Released: 2025-11-26 
• Deposition Author(s): Novoa, G., Martinez-Romero, J.M., Perez-Mata, C., Barcena, J.
• Funding Organization(s): Spanish Ministry of Science, Innovation, and Universities

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.00 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Structure of RHDV mutant 29N at 3.0 Angstroms resolution

Novoa, G., Martinez-Romero, J.M., Perez-Mata, C., Barcena, J.

To be published.

Biological Assembly 1  

Global Symmetry: Icosahedral - I  (Explore in 3D)
Global Stoichiometry: Homo 60-mer - A60 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content 

• Total Structure Weight: 18.82 kDa 
• Atom Count: 1,329 
• Modeled Residue Count: 174 
• Deposited Residue Count: 174 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Capsid protein VP60	A [auth 0]	174	Rabbit hemorrhagic disease virus	Mutation(s): 0  Gene Names: ORF1
UniProt
Find proteins for Q86119 (Rabbit hemorrhagic disease virus (strain AST89)) Explore Q86119  Go to UniProtKB:  Q86119

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.00 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
RECONSTRUCTION	cryoSPARC

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-11-26 
Deposition Author(s): Novoa, G., Martinez-Romero, J.M., Perez-Mata, C., Barcena, J.

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Funding Organization	Location	Grant Number
Spanish Ministry of Science, Innovation, and Universities	Spain	PID2023-146143NB-I00
Spanish Ministry of Science, Innovation, and Universities	Spain	PID2022-140925OB-I00

Revision History  

• Version 1.0: 2025-11-26
  Type: Initial release