9GNZ | pdb_00009gnz

Salmonella cap-filament complex

PDB DOI: https://doi.org/10.2210/pdb9GNZ/pdb
EM Map EMD-51486: EMDB EMDataResource

Classification: TRANSPORT PROTEIN
Organism(s): Salmonella enterica
Mutation(s): No

Deposited: 2024-09-04 Released: 2025-04-09
Deposition Author(s): Qin, K., Einenkel, R., Erhardt, M., Bergeron, J.R.C.
Funding Organization(s): Biotechnology and Biological Sciences Research Council (BBSRC), Human Frontier Science Program (HFSP)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.70 Å
Aggregation State: FILAMENT
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Structure of the complete extracellular bacterial flagellum reveals mechanism for flagellin incorporation

Qin, K., Einenkel, R., Al-Otaibi, N.S., Schmidt, J., Mann, D., Drobnic, T., Cohen, E.J., Gonzalez-Rodriguez, N., Harrowell, J., Shmakova, E., Beeby, M., Erhardt, M., Bergeron, J.R.C.

To be published.

Macromolecule Content

Total Structure Weight: 1,127.56 kDa
Atom Count: 78,311
Modelled Residue Count: 10,655
Deposited Residue Count: 10,750
Unique protein chains: 2

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Flagellin	A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q	495	Salmonella enterica	Mutation(s): 0
UniProt
Find proteins for Q6V2T3 (Salmonella enterica) Explore Q6V2T3 Go to UniProtKB: Q6V2T3
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q6V2T3
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Flagellar hook-associated protein 2	R, S, T, U, V	467	Salmonella enterica	Mutation(s): 0
UniProt
Find proteins for A0A663DCQ9 (Salmonella enterica) Explore A0A663DCQ9 Go to UniProtKB: A0A663DCQ9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A663DCQ9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.70 Å
Aggregation State: FILAMENT
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-04-09

Deposition Author(s):

Bergeron, J.R.C.

Funding Organization	Location	Grant Number
Biotechnology and Biological Sciences Research Council (BBSRC)	United Kingdom	BB/R009759/2
Human Frontier Science Program (HFSP)	France	RGY0080/2021

Revision History (Full details and data files)

Version 1.0: 2025-04-09
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.