9G4Q | pdb_00009g4q

Crystal structure of the salivarius-1 RNA motif


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 
    0.255 (Depositor), 0.267 (DCC) 
  • R-Value Work: 
    0.225 (Depositor), 0.233 (DCC) 
  • R-Value Observed: 
    0.226 (Depositor) 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural basis for tRNA-mimicking by salivarius-1 RNA motif

Huang, L.Lilley, D.M.J.

To be published.

Macromolecules
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains LengthOrganismImage
RNA (52-MER)
A, B
52Ligilactobacillus salivarius UCC118
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free:  0.255 (Depositor), 0.267 (DCC) 
  • R-Value Work:  0.225 (Depositor), 0.233 (DCC) 
  • R-Value Observed: 0.226 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 49.409α = 90
b = 68.094β = 90
c = 99.339γ = 90
Software Package:
Software NamePurpose
xia2data reduction
xia2data scaling
PHENIXphasing
PHENIXrefinement

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Cancer Research UKUnited KingdomA18604
National Natural Science Foundation of China (NSFC)China32171191

Revision History  (Full details and data files)

  • Version 1.0: 2025-07-30
    Type: Initial release