9F9S | pdb_00009f9s

Yeast SDD1 Disome with Mbf1


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Multiprotein bridging factor 1 is required for robust activation of the integrated stress response on collided ribosomes.

Kim, K.Q.Li, J.J.Nanjaraj Urs, A.N.Pacheco, M.E.Lasehinde, V.Denk, T.Tesina, P.Tomomatsu, S.Matsuo, Y.McDonald, E.Beckmann, R.Inada, T.Green, R.Zaher, H.S.

(2024) Mol Cell 84: 4594

  • DOI: https://doi.org/10.1016/j.molcel.2024.10.029
  • Primary Citation of Related Structures:  
    9F9S

  • PubMed Abstract: 

    In yeast, multiprotein bridging factor 1 (Mbf1) has been proposed to function in the integrated stress response (ISR) as a transcriptional coactivator by mediating a direct interaction between general transcription machinery and the process's key effector, Gcn4. However, mounting evidence has demonstrated that Mbf1 (and its human homolog EDF1) is recruited to collided ribosomes, a known activator of the ISR. In this study, we connect these otherwise seemingly disparate functions of Mbf1. Our biochemical and structural analyses reveal that Mbf1 functions as a core ISR factor by interacting with collided ribosomes to mediate Gcn2 activation. We further show that Mbf1 serves no role as a transcriptional coactivator of Gcn4. Instead, Mbf1 is required for optimal stress-induced eukaryotic initiation factor 2α (eIF2α) phosphorylation and downstream de-repression of GCN4 translation. Collectively, our data establish that Mbf1 functions in ISR signaling by acting as a direct sensor of stress-induced ribosome collisions.


  • Organizational Affiliation
    • Department of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA.

Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Uncharacterized protein YEL057CA [auth CC]233Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: SDD1YEL057C
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Multiprotein-bridging factor 1C [auth CN]151Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L6-BH [auth LA]176Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L7-AHE [auth MB],
I [auth LB]
244Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L8-AJ [auth LC],
JE [auth MC]
256Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L9-AK [auth LD],
LE [auth MD]
191Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L10L [auth LE],
NE [auth ME]
221Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P41805 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L11-AM [auth LF],
PE [auth MF]
174Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P0C0W9 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13-AN [auth LG],
RE [auth MG]
199Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L14-AO [auth LH],
TE [auth MH]
138Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L15-AP [auth LI],
VE [auth MI]
204Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P05748 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L16-AND [auth MJ],
Q [auth LJ]
199Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L17-APD [auth MK],
R [auth LK]
184Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L18-ARD [auth ML],
S [auth LL]
186Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L19-AT [auth LM],
UD [auth MM]
189Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L20-AU [auth LN],
WD [auth MN]
172Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L21-AV [auth LO],
ZD [auth MO]
160Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L23-ADE [auth Ma],
W [auth La]
137Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L43-AGF [auth Mb],
X [auth Lb]
92Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L42-AFF [auth Mc],
Y [auth Lc]
106Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L41-AEF [auth Md],
Z [auth Ld]
25Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin-60S ribosomal protein L40AA [auth Le],
DF [auth Me]
128Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P0CH08 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L39BA [auth Lf],
CF [auth Mf]
51Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L38BF [auth Mg],
CA [auth Lg]
78Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L37-AAF [auth Mh],
DA [auth Lh]
88Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36-AEA [auth Li],
ZE [auth Mi]
100Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L35-AFA [auth Lj],
YE [auth Mj]
120Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L34-AGA [auth Lk],
XE [auth Mk]
121Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L33-AHA [auth Ll],
WE [auth Ml]
107Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L32IA [auth Lm],
UE [auth Mm]
130Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L31-AJA [auth Ln],
SE [auth Mn]
113Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L30KA [auth Lo],
QE [auth Mo]
105Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L29LA [auth Lp],
OE [auth Mp]
59Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L28MA [auth Lq],
ME [auth Mq]
149Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27-AKE [auth Mr],
NA [auth Lr]
136Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L26-AIE [auth Ms],
OA [auth Ls]
127Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L25GE [auth Mt],
PA [auth Lt]
142Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L24-AFE [auth Mu],
QA [auth Lu]
155Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L22-ABE [auth Mv],
RA [auth Lv]
121Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L2-ASA [auth Lw],
XD [auth Mw]
254Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L3AE [auth Mx],
TA [auth Lx]
387Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L4-ACE [auth My],
UA [auth Ly]
362Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L5EE [auth Mz],
VA [auth Lz]
297Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein eS26AMC [auth RA],
XA [auth SA]
119Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S27-ANC [auth RB],
YA [auth SB]
82Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein eS28BZA [auth SC]67Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS14AAB [auth SD],
PC [auth RD]
56Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S30-ABB [auth SE],
QC [auth RE]
63Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
UbiquitinCB [auth SF],
RC [auth RF]
152Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein subunit beta-like proteinDB [auth SG],
SC [auth RG]
319Saccharomyces cerevisiaeMutation(s): 0 
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Find proteins for P38011 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S0-AEB [auth Sa],
UC [auth Ra]
252Saccharomyces cerevisiaeMutation(s): 0 
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Find proteins for P32905 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S1-AFB [auth Sb],
VC [auth Rb]
255Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S2GB [auth Sc],
WC [auth Rc]
254Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS3HB [auth Sd],
XC [auth Rd]
240Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S4-AIB [auth Se],
YC [auth Re]
261Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S5JB [auth Sf],
ZC [auth Rf]
225Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S6-AAD [auth Rg],
KB [auth Sg]
236Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S7-ABD [auth Rh],
LB [auth Sh]
190Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S8-ACD [auth Ri],
MB [auth Si]
200Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S9-ADD [auth Rj],
NB [auth Sj]
197Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S10-AED [auth Rk],
OB [auth Sk]
105Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S11-AFD [auth Rl],
PB [auth Sl]
156Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S12GD [auth Rm],
QB [auth Sm]
143Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S13HD [auth Rn],
RB [auth Sn]
151Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S14-ASB [auth So]137Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S15JD [auth Rp],
TB [auth Sp]
142Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S16-AKD [auth Rq],
UB [auth Sq]
143Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S17-BVB [auth Sr]136Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S18-AEC [auth Rs],
WB [auth Ss]
146Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S19-AFC [auth Rt],
XB [auth St]
144Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS10GC [auth Ru],
YB [auth Su]
121Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein eS21AHC [auth Rv],
ZB [auth Sv]
87Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S22-AAC [auth Sw],
IC [auth Rw]
130Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S23-ABC [auth Sx],
JC [auth Rx]
145Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S24-ACC [auth Sy],
KC [auth Ry]
135Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S25-ADC [auth Sz],
LC [auth Rz]
108Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S28-AOC [auth RC]67Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S14-BID [auth Ro]138Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 85
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S17-ALD [auth Rr]136Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 86
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L6-AMD [auth MA]176Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 89
MoleculeChains Sequence LengthOrganismDetailsImage
60S acidic ribosomal protein P0VD [auth MQ]312Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 90
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L12-AYD [auth MP]165Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 2
MoleculeChains LengthOrganismImage
mRNAB [auth CM]41Saccharomyces cerevisiae
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Entity ID: 4
MoleculeChains LengthOrganismImage
tRNA P-site, stalledD [auth CP]76Saccharomyces cerevisiae
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Entity ID: 5
MoleculeChains LengthOrganismImage
Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1)E [auth L1]3,396Saccharomyces cerevisiae
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Entity ID: 6
MoleculeChains LengthOrganismImage
Saccharomyces cerevisiae S288C 5.8S ribosomal RNAF [auth L2],
SD [auth M2]
158Saccharomyces cerevisiae
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Entity ID: 7
MoleculeChains LengthOrganismImage
Saccharomyces cerevisiae S288C 5S ribosomal RNAG [auth L3],
QD [auth M3]
121Saccharomyces cerevisiae
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Entity ID: 49
MoleculeChains LengthOrganismImage
Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)TC [auth R1],
WA [auth S1]
1,800Saccharomyces cerevisiae
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Entity ID: 87
MoleculeChains LengthOrganismImage
Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1) with modificationsOD [auth M1]3,396Saccharomyces cerevisiae
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Entity ID: 88
MoleculeChains LengthOrganismImage
tRNATD [auth DQ]77Saccharomyces cerevisiae
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Entity ID: 91
MoleculeChains LengthOrganismImage
tRNAHF [auth DP]76Saccharomyces cerevisiae
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Small Molecules
Ligands 4 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
SPD
Query on SPD

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SQ [auth M1],
TQ [auth M1],
UQ [auth M1]
SPERMIDINE
C7 H19 N3
ATHGHQPFGPMSJY-UHFFFAOYSA-N
ZN
Query on ZN

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JF [auth Lb]
KF [auth Lc]
LF [auth Le]
MF [auth Lh]
NF [auth Lk]
JF [auth Lb],
KF [auth Lc],
LF [auth Le],
MF [auth Lh],
NF [auth Lk],
QR [auth Mk],
SR [auth Mh],
TR [auth Me],
UI [auth SD],
UR [auth Mc],
VI [auth SF],
WR [auth Mb],
YI [auth RB]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
K
Query on K

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HQ [auth M1]
IQ [auth M1]
IR [auth Mw]
JQ [auth M1]
KQ [auth M1]
HQ [auth M1],
IQ [auth M1],
IR [auth Mw],
JQ [auth M1],
KQ [auth M1],
LQ [auth M1],
MQ [auth M1],
MR [auth ME],
NQ [auth M1],
NR [auth Mm],
OQ [auth M1],
PQ [auth M1],
QQ [auth M1],
RQ [auth M1],
RR [auth Mk],
VR [auth Mc]
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
MG
Query on MG

Download Ideal Coordinates CCD File 
AG [auth S1]
AH [auth S1]
AI [auth S1]
AJ [auth M1]
AK [auth M1]
AG [auth S1],
AH [auth S1],
AI [auth S1],
AJ [auth M1],
AK [auth M1],
AL [auth M1],
AM [auth M1],
AN [auth M1],
AO [auth M1],
AP [auth M1],
AQ [auth M1],
AR [auth M3],
BG [auth S1],
BH [auth S1],
BI [auth S1],
BJ [auth M1],
BK [auth M1],
BL [auth M1],
BM [auth M1],
BN [auth M1],
BO [auth M1],
BP [auth M1],
BQ [auth M1],
BR [auth M3],
CG [auth S1],
CH [auth S1],
CI [auth S1],
CJ [auth M1],
CK [auth M1],
CL [auth M1],
CM [auth M1],
CN [auth M1],
CO [auth M1],
CP [auth M1],
CQ [auth M1],
CR [auth M3],
DG [auth S1],
DH [auth S1],
DI [auth S1],
DJ [auth M1],
DK [auth M1],
DL [auth M1],
DM [auth M1],
DN [auth M1],
DO [auth M1],
DP [auth M1],
DQ [auth M1],
DR [auth M3],
EG [auth S1],
EH [auth S1],
EI [auth S1],
EJ [auth M1],
EK [auth M1],
EL [auth M1],
EM [auth M1],
EN [auth M1],
EO [auth M1],
EP [auth M1],
EQ [auth M1],
ER [auth M2],
FG [auth S1],
FH [auth S1],
FI [auth S1],
FJ [auth M1],
FK [auth M1],
FL [auth M1],
FM [auth M1],
FN [auth M1],
FO [auth M1],
FP [auth M1],
FQ [auth M1],
FR [auth M2],
GG [auth S1],
GH [auth S1],
GI [auth S1],
GJ [auth M1],
GK [auth M1],
GL [auth M1],
GM [auth M1],
GN [auth M1],
GO [auth M1],
GP [auth M1],
GQ [auth M1],
GR [auth M2],
HG [auth S1],
HH [auth S1],
HI [auth S1],
HJ [auth M1],
HK [auth M1],
HL [auth M1],
HM [auth M1],
HN [auth M1],
HO [auth M1],
HP [auth M1],
HR [auth MM],
IF [auth CP],
IG [auth S1],
IH [auth S1],
II [auth S1],
IJ [auth M1],
IK [auth M1],
IL [auth M1],
IM [auth M1],
IN [auth M1],
IO [auth M1],
IP [auth M1],
JG [auth S1],
JH [auth S1],
JI [auth S1],
JJ [auth M1],
JK [auth M1],
JL [auth M1],
JM [auth M1],
JN [auth M1],
JO [auth M1],
JP [auth M1],
JR [auth Mx],
KG [auth S1],
KH [auth S1],
KI [auth S1],
KJ [auth M1],
KK [auth M1],
KL [auth M1],
KM [auth M1],
KN [auth M1],
KO [auth M1],
KP [auth M1],
KR [auth Ma],
LG [auth S1],
LH [auth S1],
LI [auth S1],
LJ [auth M1],
LK [auth M1],
LL [auth M1],
LM [auth M1],
LN [auth M1],
LO [auth M1],
LP [auth M1],
LR [auth ME],
MG [auth S1],
MH [auth S1],
MI [auth S1],
MJ [auth M1],
MK [auth M1],
ML [auth M1],
MM [auth M1],
MN [auth M1],
MO [auth M1],
MP [auth M1],
NG [auth S1],
NH [auth S1],
NI [auth S1],
NJ [auth M1],
NK [auth M1],
NL [auth M1],
NM [auth M1],
NN [auth M1],
NO [auth M1],
NP [auth M1],
OF [auth S1],
OG [auth S1],
OH [auth S1],
OI [auth S1],
OJ [auth M1],
OK [auth M1],
OL [auth M1],
OM [auth M1],
ON [auth M1],
OO [auth M1],
OP [auth M1],
OR [auth MI],
PF [auth S1],
PG [auth S1],
PH [auth S1],
PI [auth S1],
PJ [auth M1],
PK [auth M1],
PL [auth M1],
PM [auth M1],
PN [auth M1],
PO [auth M1],
PP [auth M1],
PR [auth MI],
QF [auth S1],
QG [auth S1],
QH [auth S1],
QI [auth S1],
QJ [auth M1],
QK [auth M1],
QL [auth M1],
QM [auth M1],
QN [auth M1],
QO [auth M1],
QP [auth M1],
RF [auth S1],
RG [auth S1],
RH [auth S1],
RI [auth S1],
RJ [auth M1],
RK [auth M1],
RL [auth M1],
RM [auth M1],
RN [auth M1],
RO [auth M1],
RP [auth M1],
SF [auth S1],
SG [auth S1],
SH [auth S1],
SI [auth S1],
SJ [auth M1],
SK [auth M1],
SL [auth M1],
SM [auth M1],
SN [auth M1],
SO [auth M1],
SP [auth M1],
TF [auth S1],
TG [auth S1],
TH [auth S1],
TI [auth S1],
TJ [auth M1],
TK [auth M1],
TL [auth M1],
TM [auth M1],
TN [auth M1],
TO [auth M1],
TP [auth M1],
UF [auth S1],
UG [auth S1],
UH [auth S1],
UJ [auth M1],
UK [auth M1],
UL [auth M1],
UM [auth M1],
UN [auth M1],
UO [auth M1],
UP [auth M1],
VF [auth S1],
VG [auth S1],
VH [auth S1],
VJ [auth M1],
VK [auth M1],
VL [auth M1],
VM [auth M1],
VN [auth M1],
VO [auth M1],
VP [auth M1],
VQ [auth M1],
WF [auth S1],
WG [auth S1],
WH [auth S1],
WI [auth Sf],
WJ [auth M1],
WK [auth M1],
WL [auth M1],
WM [auth M1],
WN [auth M1],
WO [auth M1],
WP [auth M1],
WQ [auth M1],
XF [auth S1],
XG [auth S1],
XH [auth S1],
XI [auth Sx],
XJ [auth M1],
XK [auth M1],
XL [auth M1],
XM [auth M1],
XN [auth M1],
XO [auth M1],
XP [auth M1],
XQ [auth M1],
YF [auth S1],
YG [auth S1],
YH [auth S1],
YJ [auth M1],
YK [auth M1],
YL [auth M1],
YM [auth M1],
YN [auth M1],
YO [auth M1],
YP [auth M1],
YQ [auth M1],
ZF [auth S1],
ZG [auth S1],
ZH [auth S1],
ZI [auth M1],
ZJ [auth M1],
ZK [auth M1],
ZL [auth M1],
ZM [auth M1],
ZN [auth M1],
ZO [auth M1],
ZP [auth M1],
ZQ [auth MK]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.21.1_5286

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)Germany--

Revision History  (Full details and data files)

  • Version 1.0: 2024-12-04
    Type: Initial release
  • Version 1.1: 2024-12-18
    Changes: Data collection, Database references