9BUR

Structure of GGCX-BGP complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.95 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structure and mechanism of vitamin-K-dependent gamma-glutamyl carboxylase

Wang, R.Chen, B.Elghobashi-Meinhardt, N.Tie, J.-K.Ayala, A.Zhou, N.Qi, X.

(2025) Nature 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Vitamin K-dependent gamma-carboxylase766Homo sapiensMutation(s): 0 
Gene Names: GGCXGC
EC: 4.1.1.90
UniProt & NIH Common Fund Data Resources
Find proteins for P38435 (Homo sapiens)
Explore P38435 
Go to UniProtKB:  P38435
PHAROS:  P38435
GTEx:  ENSG00000115486 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP38435
Glycosylation
Glycosylation Sites: 3Go to GlyGen: P38435-1
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Osteocalcin106Homo sapiensMutation(s): 0 
Gene Names: BGLAP
UniProt & NIH Common Fund Data Resources
Find proteins for P02818 (Homo sapiens)
Explore P02818 
Go to UniProtKB:  P02818
PHAROS:  P02818
GTEx:  ENSG00000242252 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP02818
Sequence Annotations
Expand
  • Reference Sequence
Oligosaccharides

Help

Entity ID: 3
MoleculeChains Length2D Diagram Glycosylation3D Interactions
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranoseC [auth d]2N-Glycosylation
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.95 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Cancer Prevention and Research Institute of Texas (CPRIT)United StatesRR230054

Revision History  (Full details and data files)

  • Version 1.0: 2025-01-29
    Type: Initial release