9BGO

Pseudomonas phage DEV gp72 ejection protein (pre-ejection conformation)

• PDB DOI: https://doi.org/10.2210/pdb9BGO/pdb
• EM Map EMD-44519: EMDB EMDataResource

• Classification: STRUCTURAL PROTEIN
• Organism(s): Pseudomonas phage vB_PaeP_DEV
• Expression System: Pseudomonas aeruginosa
• Mutation(s): No 


• Deposited: 2024-04-19 Released: 2024-09-04 
• Deposition Author(s): Iglesias, S.M., Hou, C.F.D., Li, F., Cingolani, G.
• Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 4.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.

Lokareddy, R., Hou, C.F.D., Forti, F., Iglesias, S.M., Li, F., Pavlenok, M., Niederweis, M., Briani, F., Cingolani, G.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C12  (Explore in 3D)
Global Stoichiometry: Homo 12-mer - A12 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 686.2 kDa 
• Atom Count: 35,028 
• Modelled Residue Count: 4,740 
• Deposited Residue Count: 6,252 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
gp72	A, B, C, D, E, F, G, H, I, J, K, L	521	Pseudomonas phage vB_PaeP_DEV	Mutation(s): 0  Gene Names: vBPaePDEV_00072
UniProt
Find proteins for A0A2K8HKQ8 (Pseudomonas phage vB_PaeP_DEV) Explore A0A2K8HKQ8  Go to UniProtKB:  A0A2K8HKQ8

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 4.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-09-04 
Deposition Author(s): Iglesias, S.M., Hou, C.F.D., Li, F., Cingolani, G.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	GM100888
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	GM140733

Revision History  

• Version 1.0: 2024-09-04
  Type: Initial release