9A87 | pdb_00009a87

The structure of C-terminal domain of the Arabidopsis BCCP1

Integrative structure models are generated using different types of input information, including varied experimental data, physical principles, statistical preferences, and other prior information.


Integrative Structure Snapshot

  • Multi-Scale: No 
  • Multi-State: No 
  • Ordered-State: No 
  • Deposited Models: 
  • Representative Model: 

This is version 1.0 of the entry. See complete history

Literature

Solution Structure and NMR Chemical Shift Perturbations of the Arabidopsis BCCP1 Identify Intersubunit Interactions Potentially Involved in the Assembly of the Heteromeric Acetyl-CoA Carboxylase

Shivaiah, K-K.Subedi, G.P.Barb, A.W.Nikolau, B.J.

(2025) Plant Direct 

  • DOI: https://doi.org/10.1002/pld3.70057
  • Primary Citation Related Structures: 
    9A87

  • PubMed Abstract: 

    Biotin carboxyl carrier protein (BCCP) is a subunit of the heteromeric acetyl-CoA carboxylase (htACCase), and it chemically links the two half-reactions that constitute the formation of malonyl-CoA from acetyl-CoA, a critical reaction in fatty acid biosynthesis. Because plants are a major source of edible fats and oils, it is important to understand the structural organization of the plant htACCase, relative to its potential to regulate fatty acid biosynthesis in plant plastids. Moreover, unique to the plant htACCase, noncatalytic subunits called biotin attachment domain-containing (BADC) proteins are important in the assembly of the holoenzyme, and they specifically interact with the bcCP and the biotin carboxylase (BC) subunits. We report herein NMR structural studies of the Arabidopsis BCCP isozymes (bcCP1 and BCCP2). We calculated the structure of C-terminal domain of BCCP1 (K 200 -P 280 ) and explored structural changes in the BCCP1 protein upon its interactions with bc and BADC. The chemical shift perturbation experiments identified potential surface residues on the BCCP1 protein that may facilitate physical interactions between BC and BADC proteins. These studies indicate that the BADC protein interacts with a "thumb"-like protrusion, which is a common structural feature of the bacterial and plant bcCPs, and thereby acts as a potential "cap" to facilitate the assembly of a BC-BCCP-BADC complex.


  • Organizational Affiliation
    • Roy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology Iowa State University Ames Iowa USA.

Macromolecule Content 

  • Total Structure Weight: 9.86 kDa 
  • Atom Count: 591 
  • Modeled Residue Count: 79 
  • Deposited Residue Count: 79 
  • Unique protein chains: 1

Macromolecules

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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic79Arabidopsis thalianaMutation(s): 0 
Gene Names: BCCP1
UniProt
Find proteins for Q42533 (Arabidopsis thaliana)
Explore Q42533 
Go to UniProtKB:  Q42533
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ42533
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Integrative Structure Snapshot

  • Multi-Scale: No 
  • Multi-State: No 
  • Ordered-State: No 
  • Deposited Models: 
  • Representative Model: 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2025-04-09
    Type: Initial release