9A3R | pdb_00009a3r

Vimentin intermediate filament tetramer

Integrative structure models are generated using different types of input information, including varied experimental data, physical principles, statistical preferences, and other prior information.

• PDB DOI: https://doi.org/10.2210/pdb9A3R/pdb

• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2023-06-05 Released: 2024-04-05 
• Deposition Author(s): Eibauer, M., Medalia, O.

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Integrative Structure Snapshot

• Multi-Scale: No 
• Multi-State: No 
• Ordered-State: No 
• Deposited Models: 1 
• Representative Model: 1 

Literature

Vimentin filaments integrate low-complexity domains in a complex helical structure

Eibauer, M., Weber, M.S., Kronenberg-Tenga, R., Beales, C.T., Boujemaa-Paterski, R., Turgay, Y., Sivagurunathan, S., Kraxner, J., Koster, S., Goldman, R.D., Medalia, O.

(2024) Nat Struct Mol Biol 

• DOI: https://doi.org/10.1038/s41594-024-01261-2

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Homo 4-mer - A4 

Macromolecule Content 

• Total Structure Weight: 214.89 kDa 
• Atom Count: 7,456 
• Modeled Residue Count: 1,864 
• Deposited Residue Count: 1,864 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Vimentin	A, B, C, D	466	Homo sapiens	Mutation(s): 0  Gene Names: VIM
UniProt & NIH Common Fund Data Resources
Find proteins for P08670 (Homo sapiens) Explore P08670  Go to UniProtKB:  P08670
PHAROS:  P08670 GTEx:  ENSG00000026025

Experimental Data & Validation

Integrative Structure Snapshot

• Multi-Scale: No 
• Multi-State: No 
• Ordered-State: No 
• Deposited Models: 1 
• Representative Model: 1 

Structure Validation

View Full Validation Report

View Summary Validation Report

Entry History 

Deposition Data

• Released Date: 2024-04-05 
Deposition Author(s): Eibauer, M., Medalia, O.

Revision History  

• Version 1.0: 2024-04-05
  Type: Initial release