9A0D | pdb_00009a0d

In-cell architecture of an actively transcribing-translating expressome from M. pneumoniae

Integrative structure models are generated using different types of input information, including varied experimental data, physical principles, statistical preferences, and other prior information.

Integrative Structure Snapshot

  • Multi-Scale: Yes 
  • Multi-State: No 
  • Ordered-State: No 
  • Deposited Models: 1 
  • Representative Model: 1 

This is version 1.0 of the entry. See complete history. 

Literature

In-cell architecture of an actively transcribing-translating expressome

OReilly FJ, Xue L, Graziadei A, Sinn L, Lenz S, Tegunov D, Bloetz C, Singh N, Hagen WJH, Cramer P, Stuelke J, Mahamid J, Rappsilber J

(2020) Science 

Macromolecule Content 

  • Total Structure Weight: 1,509.48 kDa 
  • Modeled Residue Count: 8,429 
  • Deposited Residue Count: 8,429 
  • Unique protein chains: 25
  • Unique nucleic acid chains: 5

Macromolecules


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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
P75591540Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: nusA
UniProt
Find proteins for P75591 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Reference Sequence
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Q50295
B, C
327Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoA
EC: 2.7.7.6
UniProt
Find proteins for Q50295 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
P780131,391Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoB
EC: 2.7.7.6
UniProt
Find proteins for P78013 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
P752711,290Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoC
EC: 2.7.7.6
UniProt
Find proteins for P75271 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
P75049150Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: nusG
UniProt
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Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
Q50301219Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsE
UniProt
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Entity ID: 7
MoleculeChains  Sequence LengthOrganismDetailsImage
P75560294Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsB
UniProt
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Entity ID: 8
MoleculeChains  Sequence LengthOrganismDetailsImage
P75581108Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsJ
UniProt
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Entity ID: 9
MoleculeChains  Sequence LengthOrganismDetailsImage
P41205273Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsC
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Entity ID: 10
MoleculeChains  Sequence LengthOrganismDetailsImage
P46775205Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsD
UniProt
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Entity ID: 11
MoleculeChains  Sequence LengthOrganismDetailsImage
Q50304142Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsH
UniProt
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Entity ID: 12
MoleculeChains  Sequence LengthOrganismDetailsImage
P75179132Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsI
UniProt
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Entity ID: 16
MoleculeChains  Sequence LengthOrganismDetailsImage
P7509085Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoE
UniProt
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Entity ID: 17
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitE92Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsF
UniProt
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Entity ID: 18
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitF153Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsG
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Entity ID: 19
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitJ118Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsK
UniProt
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Entity ID: 20
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitK135Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsL
UniProt
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Entity ID: 21
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitL119Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsM
UniProt
Find proteins for Q50297 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 22
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitM60Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsZ
UniProt
Find proteins for Q50305 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 23
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitN84Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsO
UniProt
Find proteins for P75173 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 24
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitO80Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsP
UniProt
Find proteins for P75131 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 25
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitP83Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsQ
UniProt
Find proteins for Q50309 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 26
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitQ71Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsR
UniProt
Find proteins for P75541 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 27
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitR83Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsS
UniProt
Find proteins for P75576 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 29
MoleculeChains  Sequence LengthOrganismDetailsImage
30Ssubunitj77Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsT
UniProt
Find proteins for P75237 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Reference Sequence
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Entity ID: 13
MoleculeChains LengthOrganismImage
DNA1N39N/A
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Entity ID: 14
MoleculeChains LengthOrganismImage
longRNAR1
O, P
46N/A
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Entity ID: 15
MoleculeChains LengthOrganismImage
DNA1T39N/A
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Entity ID: 28
MoleculeChains LengthOrganismImage
30SsubunitT1,544N/A
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Entity ID: 30
MoleculeChains LengthOrganismImage
30SsubunitZ77N/A
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Reference Sequence

Experimental Data & Validation

Integrative Structure Snapshot

  • Multi-Scale: Yes 
  • Multi-State: No 
  • Ordered-State: No 
  • Deposited Models: 1 
  • Representative Model: 1 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-07-30
    Type: Initial release