9A0D | pdb_00009a0d

In-cell architecture of an actively transcribing-translating expressome from M. pneumoniae

Integrative structure models are generated using different types of input information, including varied experimental data, physical principles, statistical preferences, and other prior information.

Integrative Structure Snapshot

  • Multi-Scale: Yes 
  • Multi-State: No 
  • Ordered-State: No 
  • Deposited Models: 1 
  • Representative Model: 1 

This is version 1.0 of the entry. See complete history. 

Literature

In-cell architecture of an actively transcribing-translating expressome

OReilly FJ, Xue L, Graziadei A, Sinn L, Lenz S, Tegunov D, Bloetz C, Singh N, Hagen WJH, Cramer P, Stuelke J, Mahamid J, Rappsilber J

(2020) Science 

Macromolecule Content 

  • Total Structure Weight: 1,509.48 kDa 
  • Modeled Residue Count: 8,429 
  • Deposited Residue Count: 8,429 
  • Unique protein chains: 25
  • Unique nucleic acid chains: 5

Macromolecules


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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
P75591540Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: nusA
UniProt
Find proteins for P75591 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Reference Sequence
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Q50295
B, C
327Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoA
EC: 2.7.7.6
UniProt
Find proteins for Q50295 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
P780131,391Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoB
EC: 2.7.7.6
UniProt
Find proteins for P78013 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Reference Sequence
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Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
P752711,290Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoC
EC: 2.7.7.6
UniProt
Find proteins for P75271 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
P75049150Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: nusG
UniProt
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Reference Sequence
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Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
Q50301219Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsE
UniProt
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Entity ID: 7
MoleculeChains  Sequence LengthOrganismDetailsImage
P75560294Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsB
UniProt
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Entity ID: 8
MoleculeChains  Sequence LengthOrganismDetailsImage
P75581108Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsJ
UniProt
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Entity ID: 9
MoleculeChains  Sequence LengthOrganismDetailsImage
P41205273Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsC
UniProt
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Entity ID: 10
MoleculeChains  Sequence LengthOrganismDetailsImage
P46775205Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsD
UniProt
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Entity ID: 11
MoleculeChains  Sequence LengthOrganismDetailsImage
Q50304142Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsH
UniProt
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Entity ID: 12
MoleculeChains  Sequence LengthOrganismDetailsImage
P75179132Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsI
UniProt
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Entity ID: 16
MoleculeChains  Sequence LengthOrganismDetailsImage
P7509085Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpoE
UniProt
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Entity ID: 17
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitE92Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsF
UniProt
Find proteins for P75543 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 18
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitF153Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsG
UniProt
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Entity ID: 19
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitJ118Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsK
UniProt
Find proteins for Q50296 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 20
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitK135Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsL
UniProt
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Entity ID: 21
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitL119Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsM
UniProt
Find proteins for Q50297 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 22
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitM60Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsZ
UniProt
Find proteins for Q50305 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 23
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitN84Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsO
UniProt
Find proteins for P75173 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 24
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitO80Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsP
UniProt
Find proteins for P75131 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 25
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitP83Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsQ
UniProt
Find proteins for Q50309 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 26
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitQ71Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsR
UniProt
Find proteins for P75541 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 27
MoleculeChains  Sequence LengthOrganismDetailsImage
30SsubunitR83Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsS
UniProt
Find proteins for P75576 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
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Entity ID: 29
MoleculeChains  Sequence LengthOrganismDetailsImage
30Ssubunitj77Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)Mutation(s): 0 
Gene Names: rpsT
UniProt
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Reference Sequence
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Entity ID: 13
MoleculeChains LengthOrganismImage
DNA1N39N/A
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Entity ID: 14
MoleculeChains LengthOrganismImage
longRNAR1
O, P
46N/A
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Entity ID: 15
MoleculeChains LengthOrganismImage
DNA1T39N/A
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Entity ID: 28
MoleculeChains LengthOrganismImage
30SsubunitT1,544N/A
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Entity ID: 30
MoleculeChains LengthOrganismImage
30SsubunitZ77N/A
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Reference Sequence

Experimental Data & Validation

Integrative Structure Snapshot

  • Multi-Scale: Yes 
  • Multi-State: No 
  • Ordered-State: No 
  • Deposited Models: 1 
  • Representative Model: 1 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-07-30
    Type: Initial release