Structure of in situ PBS-PSII supercomplex at 3.5 Angstroms resolution.
You, X., Zhang, X., Xiao, Y.N., Sun, S., Sui, S.F.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LRC1 | 254 | Arthrospira sp. FACHB-439 | Mutation(s): 0  | ||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LCM | B [auth BB], C [auth CB], EH [auth B4], FH [auth C4] | 914 | Arthrospira sp. FACHB-439 | Mutation(s): 0  | |
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core | 67 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: apcC | ||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II protein D1 | 359 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbA1 EC: 1.10.3.9 | ||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II CP47 reaction center protein | 509 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbB | ||
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Entity ID: 8 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II CP43 reaction center protein | 469 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbC | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 9 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II D2 protein | 352 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbD1, psbD EC: 1.10.3.9 | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 10 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome b559 subunit alpha | 82 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbE | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 11 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome b559 subunit beta | 44 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbF | ||
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Entity ID: 12 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein H | 67 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbH | ||
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Entity ID: 13 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein I | 38 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbI | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 14 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein J | 39 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbJ | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 15 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein K | 45 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbK | ||
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Entity ID: 16 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein L | 39 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbL | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 17 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein M | 37 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbM | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 18 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II extrinsic protein O | 278 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbO | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 19 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
PsbQ protein | 164 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbQ | ||
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Entity ID: 20 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein Y | 39 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbY | ||
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 21 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LPP1 | BB [auth SE], BF [auth S1], FA [auth SD] | 47 | Arthrospira sp. FACHB-439 | Mutation(s): 0  | |
Sequence AnnotationsExpand | |||||
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Entity ID: 22 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein T | 31 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbTc, psbT | ||
Entity Groups   | |||||
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Entity ID: 23 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
PsbU | 95 | Arthrospira sp. FACHB-439 | Mutation(s): 0  | ||
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Entity ID: 24 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II extrinsic protein V | 163 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbV1, psbV | ||
Entity Groups   | |||||
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Entity ID: 25 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein X | 48 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbX | ||
Entity Groups   | |||||
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Entity ID: 26 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein Psb30 | 43 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psb30 | ||
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Entity ID: 27 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Photosystem II reaction center protein Z | 63 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: psbZ | ||
Entity Groups   | |||||
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Entity ID: 28 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LPP2 | IB [auth EF], OC [auth EK], TB [auth BG], ZC [auth BL] | 150 | Arthrospira sp. FACHB-439 | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 29 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Allophycocyanin beta-18 subunit | EC [auth QG], GN [auth gF], KD [auth QL], NP [auth gK] | 169 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: apcF | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 30 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Allophycocyanin-B alpha subunit | JC [auth VG], MN [auth mF], PD [auth VL], TP [auth mK] | 161 | Arthrospira sp. FACHB-439 | Mutation(s): 0  Gene Names: apcD | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 16 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DGD Query on DGD | ATA [auth cE] CX [auth HE] FX [auth JE] HW [auth CE] IW [auth CE] | DIGALACTOSYL DIACYL GLYCEROL (DGDG) C51 H96 O15 LDQFLSUQYHBXSX-HXXRYREZSA-N | |||
CLA Query on CLA | ABA [auth C1] AEA [auth b1] APA [auth cD] AR [auth AD] ASA [auth bE] | CHLOROPHYLL A C55 H72 Mg N4 O5 ATNHDLDRLWWWCB-AENOIHSZSA-M | |||
PHO Query on PHO | BFA [auth d1] BT [auth DD] DOA [auth aD] DT [auth DD] DTA [auth dE] | PHEOPHYTIN A C55 H74 N4 O5 CQIKWXUXPNUNDV-RCBXBCQGSA-N | |||
SQD Query on SQD | CR [auth AD] CS [auth BD] EQA [auth dD] FCA [auth D1] FS [auth CD] | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL C41 H78 O12 S RVUUQPKXGDTQPG-JUDHQOGESA-N | |||
LMG Query on LMG | AOA [auth aD] ARA [auth yD] AU [auth MD] BQA [auth dD] BU [auth TD] | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE C45 H86 O10 DCLTVZLYPPIIID-CVELTQQQSA-N | |||
PL9 Query on PL9 | BR [auth AD] HFA [auth d1] IDA [auth a1] IT [auth DD] JRA [auth aE] | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE C53 H80 O2 FKUYMLZIRPABFK-UHFFFAOYSA-N | |||
LHG Query on LHG | ACA [auth D1] AQA [auth dD] BCA [auth D1] BGA [auth l1] BS [auth BD] | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE C38 H75 O10 P BIABMEZBCHDPBV-MPQUPPDSSA-N | |||
HEM Query on HEM | DU [auth VD] FGA [auth v1] GCA [auth E1] GQA [auth fD] IUA [auth vE] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L | |||
CYC Query on CYC | AHA [auth B2] AIA [auth s4] AJA [auth f5] AKA [auth m6] ALA [auth g8] | PHYCOCYANOBILIN C33 H40 N4 O6 VXTXPYZGDQPMHK-GMXXPEQVSA-N |