8WQL | pdb_00008wql

In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
T [auth DD]e8wqlDD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
S [auth CD]e8wqlCD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
R [auth BD]e8wqlBD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
Q [auth AD]e8wqlAD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
J [auth UB]e8wqlUB01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
E [auth PB]e8wqlPB01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
JF [auth c2]e8wqlc201 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
IF [auth b2]e8wqlb201 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
JC [auth VG]e8wqlVG01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
D [auth OB]e8wqlOB01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
EC [auth QG]e8wqlQG01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
LA [auth ZD]e8wqlZD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
KA [auth YD]e8wqlYD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
JA [auth XD]e8wqlXD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
IA [auth VD]e8wqlVD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
HA [auth UD]e8wqlUD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
GA [auth TD]e8wqlTD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
EA [auth RD]e8wqlRD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
DA [auth QD]e8wqlQD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
CA [auth OD]e8wqlOD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
BA [auth MD]e8wqlMD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
AA [auth LD]e8wqlLD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
Z [auth KD]e8wqlKD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
Y [auth JD]e8wqlJD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
X [auth ID]e8wqlID01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
W [auth HD]e8wqlHD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
V [auth FD]e8wqlFD01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
U [auth ED]e8wqlED01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)
A [auth BA]e8wqlBA01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT:F:ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Photosystem II D2 protein---
Photosystem II CP43 reaction center protein---
Photosystem II CP47 reaction center protein---
Photosystem II protein D1---
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core---
Allophycocyanin beta chain---
Phycocyanin beta subunit-
C-phycocyanin alpha subunit---
JC [auth VG],
MN [auth mF],
PD [auth VL],
TP [auth mK]
Allophycocyanin-B alpha subunit---
Allophycocyanin alpha chain---
EC [auth QG],
GN [auth gF],
KD [auth QL],
NP [auth gK]
Allophycocyanin beta-18 subunit---
IB [auth EF],
OC [auth EK],
TB [auth BG],
ZC [auth BL]
LPP2---
Photosystem II reaction center protein Z---
Photosystem II reaction center protein Psb30---
Photosystem II reaction center protein X---
Photosystem II extrinsic protein V---
PsbU---
Photosystem II reaction center protein T---
BB [auth SE],
BF [auth S1],
FA [auth SD]
LPP1---
Photosystem II reaction center protein Y---
B [auth BB],
C [auth CB],
EH [auth B4],
FH [auth C4]
LCM---
PsbQ protein---
Photosystem II extrinsic protein O---
Photosystem II reaction center protein M---
Photosystem II reaction center protein L---
Photosystem II reaction center protein K---
Photosystem II reaction center protein J---
Photosystem II reaction center protein I---
Photosystem II reaction center protein H---
Cytochrome b559 subunit beta---
Cytochrome b559 subunit alpha---
LRC1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR038719Phycobilisome, alpha/beta subunit superfamilyHomologous Superfamily
IPR006247Phycocyanin, beta subunitFamily
IPR009050Globin-like superfamilyHomologous Superfamily
IPR012128Phycobilisome, alpha/beta subunitFamily