In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| T [auth DD] | e8wqlDD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| S [auth CD] | e8wqlCD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| R [auth BD] | e8wqlBD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| Q [auth AD] | e8wqlAD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| J [auth UB] | e8wqlUB01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| E [auth PB] | e8wqlPB01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| JF [auth c2] | e8wqlc201 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| IF [auth b2] | e8wqlb201 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| JC [auth VG] | e8wqlVG01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| D [auth OB] | e8wqlOB01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| EC [auth QG] | e8wqlQG01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| LA [auth ZD] | e8wqlZD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| KA [auth YD] | e8wqlYD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| JA [auth XD] | e8wqlXD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| IA [auth VD] | e8wqlVD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| HA [auth UD] | e8wqlUD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| GA [auth TD] | e8wqlTD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| EA [auth RD] | e8wqlRD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| DA [auth QD] | e8wqlQD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| CA [auth OD] | e8wqlOD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| BA [auth MD] | e8wqlMD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| AA [auth LD] | e8wqlLD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| Z [auth KD] | e8wqlKD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| Y [auth JD] | e8wqlJD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| X [auth ID] | e8wqlID01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| W [auth HD] | e8wqlHD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| V [auth FD] | e8wqlFD01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| U [auth ED] | e8wqlED01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) | |
| A [auth BA] | e8wqlBA01 | A: ATPD N-terminal domain-like | X: N-terminal domain of the delta subunit of the F1F0-ATP synthase | H: Galactose-binding domain-like | T: | F: | ECOD (20:10:01) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Photosystem II D2 protein | - | - | - | |
| Photosystem II CP43 reaction center protein | - | - | - | |
| Photosystem II CP47 reaction center protein | - | - | - | |
| Photosystem II protein D1 | - | - | - | |
| Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core | - | - | - | |
| Allophycocyanin beta chain | - | - | - | |
| Phycocyanin beta subunit | - |
| ||
| C-phycocyanin alpha subunit | - | - | - | |
| JC [auth VG], MN [auth mF], PD [auth VL], TP [auth mK] | Allophycocyanin-B alpha subunit | - | - | - |
| Allophycocyanin alpha chain | - | - | - | |
| EC [auth QG], GN [auth gF], KD [auth QL], NP [auth gK] | Allophycocyanin beta-18 subunit | - | - | - |
| IB [auth EF], OC [auth EK], TB [auth BG], ZC [auth BL] | LPP2 | - | - | - |
| Photosystem II reaction center protein Z | - | - | - | |
| Photosystem II reaction center protein Psb30 | - | - | - | |
| Photosystem II reaction center protein X | - | - | - | |
| Photosystem II extrinsic protein V | - | - | - | |
| PsbU | - | - | - | |
| Photosystem II reaction center protein T | - | - | - | |
| BB [auth SE], BF [auth S1], FA [auth SD] | LPP1 | - | - | - |
| Photosystem II reaction center protein Y | - | - | - | |
| B [auth BB], C [auth CB], EH [auth B4], FH [auth C4] | LCM | - | - | - |
| PsbQ protein | - | - | - | |
| Photosystem II extrinsic protein O | - | - | - | |
| Photosystem II reaction center protein M | - | - | - | |
| Photosystem II reaction center protein L | - | - | - | |
| Photosystem II reaction center protein K | - | - | - | |
| Photosystem II reaction center protein J | - | - | - | |
| Photosystem II reaction center protein I | - | - | - | |
| Photosystem II reaction center protein H | - | - | - | |
| Cytochrome b559 subunit beta | - | - | - | |
| Cytochrome b559 subunit alpha | - | - | - | |
| LRC1 | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038719 | Phycobilisome, alpha/beta subunit superfamily | Homologous Superfamily | |
| IPR006247 | Phycocyanin, beta subunit | Family | |
| IPR009050 | Globin-like superfamily | Homologous Superfamily | |
| IPR012128 | Phycobilisome, alpha/beta subunit | Family |














