Download MendeleyCryo-EM structure of RNA device 43 truncation mutant, apo state
Stagno, J.R., Deme, J.C., Lee, Y.-T., Wang, Y.-X., Lea, S.M.To be published.
8TKJ | pdb_00008tkj
Cryo-EM structure of RNA device 43, apo state
- PDB DOI: https://doi.org/10.2210/pdb8TKJ/pdb
- NAKB: 8TKJ
- EM Map EMD-41353: EMDB EMDataResource
- Classification: RNA
- Organism(s): synthetic construct
- Mutation(s): No
- Deposited: 2023-07-25 Released: 2025-02-19
- Funding Organization(s): National Institutes of Health/National Cancer Institute (NIH/NCI)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.20 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar nucleic acids by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| RNA Device 43 | 124 | synthetic construct |  | ||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.20 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| MODEL REFINEMENT | PHENIX | 1.21rc1_4924 |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-02-19 Deposition Author(s): Stagno, J.R., Deme, J.C., Lee, Y.-T., Wang, Y.-X., Lea, S.M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | -- |
Revision History (Full details and data files)
- Version 1.0: 2025-02-19
Type: Initial release
