8T6R

Acinetobacter baumannii 118362 family 2A cargo-loaded encapsulin shell


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 1.78 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

A widespread bacterial protein compartment sequesters and stores elemental sulfur.

Benisch, R.Andreas, M.P.Giessen, T.W.

(2024) Sci Adv 10: eadk9345-eadk9345

  • DOI: https://doi.org/10.1126/sciadv.adk9345
  • Primary Citation of Related Structures:  
    8T6R

  • PubMed Abstract: 

    Subcellular compartments often serve to store nutrients or sequester labile or toxic compounds. As bacteria mostly do not possess membrane-bound organelles, they often have to rely on protein-based compartments. Encapsulins are one of the most prevalent protein-based compartmentalization strategies found in prokaryotes. Here, we show that desulfurase encapsulins can sequester and store large amounts of crystalline elemental sulfur. We determine the 1.78-angstrom cryo-EM structure of a 24-nanometer desulfurase-loaded encapsulin. Elemental sulfur crystals can be formed inside the encapsulin shell in a desulfurase-dependent manner with l-cysteine as the sulfur donor. Sulfur accumulation can be influenced by the concentration and type of sulfur source in growth medium. The selectively permeable protein shell allows the storage of redox-labile elemental sulfur by excluding cellular reducing agents, while encapsulation substantially improves desulfurase activity and stability. These findings represent an example of a protein compartment able to accumulate and store elemental sulfur.


  • Organizational Affiliation

    Program in Chemical Biology, University of Michigan, Ann Arbor, MI 48109, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Major membrane protein I310Acinetobacter baumannii 118362Mutation(s): 0 
Gene Names: mmpIJ517_0527
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 1.78 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC4.2.1
MODEL REFINEMENTCoot0.8.9
MODEL REFINEMENTPHENIX1.19.2-4158

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States5R35GM133325-04

Revision History  (Full details and data files)

  • Version 1.0: 2024-03-13
    Type: Initial release