8RCZ | pdb_00008rcz

Structure of the enoyl-ACP reductase FabV from Pseudomonas aeruginosa with NADH cofactor

• PDB DOI: https://doi.org/10.2210/pdb8RCZ/pdb

• Classification: OXIDOREDUCTASE
• Organism(s): Pseudomonas aeruginosa
• Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
• Mutation(s): No 


• Deposited: 2023-12-07 Released: 2024-12-18 
• Deposition Author(s): Vandebroek, L., Van Olmen, F., Voet, A.R.D., Verwilst, P.
• Funding Organization(s): Research Foundation - Flanders (FWO)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.25 Å
• R-Value Free: 
  0.242 (Depositor), 0.245 (DCC) 
• R-Value Work: 
  0.197 (Depositor), 0.198 (DCC) 
• R-Value Observed: 
  0.199 (Depositor) 

Starting Model: in silico

Literature

Structure of the enoyl-ACP reductase FabV from Pseudomonas aeruginosa with NADH cofactor

Vandebroek, L., Van Olmen, F., Voet, A.R.D., Verwilst, P.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 89.12 kDa 
• Atom Count: 6,220 
• Modeled Residue Count: 775 
• Deposited Residue Count: 802 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Enoyl-[acyl-carrier-protein] reductase [NADH]	A, B	401	Pseudomonas aeruginosa	Mutation(s): 0  Gene Names: fabV EC: 1.3.1.9 (UniProt), 1.3.1.44 (UniProt)
UniProt
Find proteins for Q9HZP8 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HZP8  Go to UniProtKB:  Q9HZP8

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
NAI (Subject of Investigation/LOI)	C [auth A], D [auth B]	1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE C21 H29 N7 O14 P2 BOPGDPNILDQYTO-NNYOXOHSSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.25 Å
• R-Value Free:  0.242 (Depositor), 0.245 (DCC) 
• R-Value Work:  0.197 (Depositor), 0.198 (DCC) 
• R-Value Observed: 0.199 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 54.744	α = 90
b = 88.729	β = 90
c = 158.172	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
Aimless	data scaling
PHASER	phasing
XDS	data reduction

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-12-18 
Deposition Author(s): Vandebroek, L., Van Olmen, F., Voet, A.R.D., Verwilst, P.

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Funding Organization	Location	Grant Number
Research Foundation - Flanders (FWO)	Belgium	1235722N

Revision History  

• Version 1.0: 2024-12-18
  Type: Initial release