8OUN

Arf GTPase from the asgard Gerdarchaea : GerdArfR1 bound to GDP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.214 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Arf Family GTPases are present in Asgard archaea

Menetrey, J.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
GTP-binding protein
A, B
189Asgard group archaeonMutation(s): 0 
Gene Names: FK733_07565
UniProt
Find proteins for A0A8J7ZFD1 (Asgard group archaeon)
Explore A0A8J7ZFD1 
Go to UniProtKB:  A0A8J7ZFD1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8J7ZFD1
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.214 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 43.29α = 90
b = 59.93β = 102.09
c = 72.35γ = 90
Software Package:
Software NamePurpose
BUSTERrefinement
ARP/wARPmodel building
autoPROCdata reduction
autoPROCdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Agence Nationale de la Recherche (ANR)FranceANR-20-CE13-0007

Revision History  (Full details and data files)

  • Version 1.0: 2024-05-01
    Type: Initial release