Dynamics of the Herpes simplex virus DNA polymerase holoenzyme during DNA synthesis and proof-reading revealed by Cryo-EM
Gustavsson, E., Grunewald, K., Elias, P., Hallberg, B.M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA polymerase catalytic subunit | B [auth A] | 1,235 | Human alphaherpesvirus 1 strain KOS | Mutation(s): 1  Gene Names: UL30 EC: 2.7.7.7 (PDB Primary Data), 3.1.26.4 (PDB Primary Data) | |
UniProt | |||||
Find proteins for P04293 (Human herpesvirus 1 (strain 17)) Explore P04293  Go to UniProtKB:  P04293 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04293 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (47-MER) | A [auth C] | 47 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA (Subject of Investigation/LOI) Query on CA | C [auth A], D [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Task | Software Package | Version |
---|---|---|
MODEL REFINEMENT | Coot | |
RECONSTRUCTION | cryoSPARC | 4 |
Funding Organization | Location | Grant Number |
---|---|---|
Swedish Research Council | Sweden | 2017-06702 |
German Research Foundation (DFG) | Germany | 152/772-1|152/774-1|152/775-1|152/776-1|152/777-1 FUGG |