8J78

Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state

• PDB DOI: https://doi.org/10.2210/pdb8J78/pdb
• EM Map EMD-36034: EMDB EMDataResource

• Classification: CYTOSOLIC PROTEIN
• Organism(s): Homo sapiens
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2023-04-27 Released: 2024-05-08 
• Deposition Author(s): Liu, D.S., Su, J.Y.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.88 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state

Liu, D.S., Su, J.Y.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D3  (Explore in 3D)
Global Stoichiometry: Hetero 12-mer - A6B6 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 853.31 kDa 
• Atom Count: 55,026 
• Modelled Residue Count: 7,102 
• Deposited Residue Count: 7,728 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	A [auth F], C [auth J], D [auth L], F [auth A], H [auth D], I [auth H]	563	Homo sapiens	Mutation(s): 0  Gene Names: MCCC2, MCCB EC: 6.4.1.4
UniProt & NIH Common Fund Data Resources
Find proteins for Q9HCC0 (Homo sapiens) Explore Q9HCC0  Go to UniProtKB:  Q9HCC0
PHAROS:  Q9HCC0 GTEx:  ENSG00000131844

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	B [auth I], E [auth K], G [auth C], J [auth B], K [auth E], L [auth G]	725	Homo sapiens	Mutation(s): 0  Gene Names: MCCC1, MCCA EC: 6.4.1.4
UniProt & NIH Common Fund Data Resources
Find proteins for Q96RQ3 (Homo sapiens) Explore Q96RQ3  Go to UniProtKB:  Q96RQ3
PHAROS:  Q96RQ3 GTEx:  ENSG00000078070

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
BTI (Subject of Investigation/LOI)	M [auth I], N [auth K], O [auth C], P [auth B], Q [auth E], R [auth G]	5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL C10 H16 N2 O2 S ARDNWGMSCXSPBF-CIUDSAMLSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.88 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-05-08 
Deposition Author(s): Liu, D.S., Su, J.Y.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32071192

Revision History  

• Version 1.0: 2024-05-08
  Type: Initial release