8IPA

Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximide


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.

Tanaka, M.Yokoyama, T.Saito, H.Nishimoto, M.Tsuda, K.Sotta, N.Shigematsu, H.Shirouzu, M.Iwasaki, S.Ito, T.Fujiwara, T.

(2024) Nat Chem Biol 20: 605-614

  • DOI: https://doi.org/10.1038/s41589-023-01513-0
  • Primary Citation of Related Structures:  
    8IP8, 8IP9, 8IPA, 8IPB

  • PubMed Abstract: 

    In response to environmental changes, cells flexibly and rapidly alter gene expression through translational controls. In plants, the translation of NIP5;1, a boric acid diffusion facilitator, is downregulated in response to an excess amount of boric acid in the environment through upstream open reading frames (uORFs) that consist of only AUG and stop codons. However, the molecular details of how this minimum uORF controls translation of the downstream main ORF in a boric acid-dependent manner have remained unclear. Here, by combining ribosome profiling, translation complex profile sequencing, structural analysis with cryo-electron microscopy and biochemical assays, we show that the 80S ribosome assembled at AUG-stop migrates into the subsequent RNA segment, followed by downstream translation initiation, and that boric acid impedes this process by the stable confinement of eukaryotic release factor 1 on the 80S ribosome on AUG-stop. Our results provide molecular insight into translation regulation by a minimum and environment-responsive uORF.


  • Organizational Affiliation

    Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.


Macromolecules

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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS24B [auth ba]137Triticum aestivumMutation(s): 0 
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Find proteins for A0A3B6PK86 (Triticum aestivum)
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS8C [auth ca]225Triticum aestivumMutation(s): 0 
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Find proteins for A0A3B6AYT7 (Triticum aestivum)
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS10D [auth da]188Triticum aestivumMutation(s): 0 
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Find proteins for W5AUH7 (Triticum aestivum)
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS12E [auth ga]142Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5FV77 (Triticum aestivum)
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
RACK1F [auth ha]332Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5D4F5 (Triticum aestivum)
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS3G [auth ia]227Triticum aestivumMutation(s): 0 
UniProt
Find proteins for Q8L804 (Triticum aestivum)
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS4H [auth ja]265Triticum aestivumMutation(s): 0 
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Find proteins for A0A1D5SLI4 (Triticum aestivum)
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS7I [auth ka]200Triticum aestivumMutation(s): 0 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS9J [auth la]149Triticum aestivumMutation(s): 0 
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Find proteins for A0A3B6HX49 (Triticum aestivum)
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS10K [auth ma]127Triticum aestivumMutation(s): 0 
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Find proteins for U5HTD8 (Triticum aestivum)
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS11L [auth na]151Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6SS17 (Triticum aestivum)
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS13M [auth oa]152Triticum aestivumMutation(s): 0 
UniProt
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS15N [auth pa]151Triticum aestivumMutation(s): 0 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS17O [auth qa]143Triticum aestivumMutation(s): 0 
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Find proteins for A0A3B5YWZ3 (Triticum aestivum)
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS19P [auth ra]155Triticum aestivumMutation(s): 0 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS19Q [auth sa]154Triticum aestivumMutation(s): 0 
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS25R [auth ta]108Triticum aestivumMutation(s): 0 
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Find proteins for W5EP45 (Triticum aestivum)
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS28S [auth ua]86Triticum aestivumMutation(s): 0 
UniProt
Find proteins for Q7X9K4 (Triticum aestivum)
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS8T [auth va]129Triticum aestivumMutation(s): 0 
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Find proteins for A0A077RZD1 (Triticum aestivum)
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS14U [auth wa]56Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6LU46 (Triticum aestivum)
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS27V [auth xa]86Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5HZ68 (Triticum aestivum)
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS30W [auth ya]62Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6S9M7 (Triticum aestivum)
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS2X [auth za]308Triticum aestivumMutation(s): 0 
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Find proteins for W5E2W7 (Triticum aestivum)
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS1Y [auth bb]263Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6IU74 (Triticum aestivum)
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS21Z [auth cb]82Triticum aestivumMutation(s): 0 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS26AA [auth db]156Triticum aestivumMutation(s): 0 
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS4BA [auth eb]195Triticum aestivumMutation(s): 0 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS5CA [auth fb]274Triticum aestivumMutation(s): 0 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS6DA [auth gb]250Triticum aestivumMutation(s): 0 
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Find proteins for A0A2X0SLI3 (Triticum aestivum)
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eS7EA [auth hb]192Triticum aestivumMutation(s): 0 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein uS17FA [auth ib]159Triticum aestivumMutation(s): 0 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein eL8GA [auth AA]258Triticum aestivumMutation(s): 0 
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Find proteins for A0A3B6RED0 (Triticum aestivum)
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL21HA [auth BA]164Triticum aestivumMutation(s): 0 
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL27IA [auth CA]137Triticum aestivumMutation(s): 0 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL2JA [auth DA]261Triticum aestivumMutation(s): 0 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL5KA [auth EA]180Triticum aestivumMutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL6LA [auth FA]189Triticum aestivumMutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL14MA [auth GA]140Triticum aestivumMutation(s): 0 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL15NA [auth HA]204Triticum aestivumMutation(s): 0 
UniProt
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL15OA [auth IA]145Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6DCS5 (Triticum aestivum)
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL18PA [auth JA]187Triticum aestivumMutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL18QA [auth KA]301Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5BZZ2 (Triticum aestivum)
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL19RA [auth LA]213Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6DA12 (Triticum aestivum)
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL22SA [auth MA]170Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5FSM8 (Triticum aestivum)
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL23TA [auth NA]152Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A1D5UQZ5 (Triticum aestivum)
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL24UA [auth OA]162Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5CDW4 (Triticum aestivum)
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL24VA [auth PA]157Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6GQI2 (Triticum aestivum)
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL28WA [auth QA]147Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B5ZZN9 (Triticum aestivum)
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL30XA [auth RA]112Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W4ZRU3 (Triticum aestivum)
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL31YA [auth SA]123Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5G990 (Triticum aestivum)
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL32ZA [auth TA]133Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6SDD9 (Triticum aestivum)
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL37AB [auth UA]93Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A1D6BC85 (Triticum aestivum)
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL39BB [auth VA]76Triticum aestivumMutation(s): 0 
UniProt
Find proteins for M7ZU91 (Triticum urartu)
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL42CB [auth WA]105Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5HX73 (Triticum aestivum)
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL14DB [auth XA]135Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6DGT8 (Triticum aestivum)
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL20EB [auth YA]178Triticum aestivumMutation(s): 0 
UniProt
Find proteins for W5D7B8 (Triticum aestivum)
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL22FB [auth ZA]130Triticum aestivumMutation(s): 0 
UniProt
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL36GB [auth AB]112Triticum aestivumMutation(s): 0 
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Find proteins for Q5I7L5 (Triticum aestivum)
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL29HB [auth BB]124Triticum aestivumMutation(s): 0 
UniProt
Find proteins for Q8L805 (Triticum aestivum)
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL30IB [auth CB]244Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6DM38 (Triticum aestivum)
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL3JB [auth DB]389Triticum aestivumMutation(s): 0 
UniProt
Find proteins for Q7X748 (Triticum aestivum)
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL4KB [auth EB]404Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B5ZXX7 (Triticum aestivum)
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL13LB [auth FB]206Triticum aestivumMutation(s): 0 
UniProt
Find proteins for Q5I7L1 (Triticum aestivum)
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL43MB [auth GB]92Triticum aestivumMutation(s): 0 
UniProt
Find proteins for D8L9P6 (Triticum aestivum)
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein uL16NB [auth HB]217Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6HUM3 (Triticum aestivum)
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL41OB [auth IB]25Oryza sativaMutation(s): 0 
UniProt
Find proteins for P62125 (Oryza sativa subsp. japonica)
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL40PB [auth JB]129Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A1D5XNC2 (Triticum aestivum)
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL13QB [auth KB]208Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6NJZ9 (Triticum aestivum)
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL6RB [auth LB]219Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6QGW3 (Triticum aestivum)
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL33SB [auth MB]112Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A0C4BK99 (Triticum aestivum)
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL38TB [auth NB]69Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A1D5W6Q2 (Triticum aestivum)
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL29UB [auth OB]60Triticum aestivumMutation(s): 0 
UniProt
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein eL34VB [auth PB]119Triticum aestivumMutation(s): 0 
UniProt
Find proteins for A0A3B6RFY8 (Triticum aestivum)
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
eukaryotic release factor 1AC [auth bl]437Triticum aestivumMutation(s): 0 
UniProt
Find proteins for I3NM28 (Triticum aestivum)
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Entity ID: 1
MoleculeChains LengthOrganismImage
18S ribosomal RNAA [auth aa]1,810Triticum aestivum
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Entity ID: 75
MoleculeChains LengthOrganismImage
60S ribosomal RNAWB [auth RB]3,386Triticum aestivum
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Entity ID: 76
MoleculeChains LengthOrganismImage
5.8S ribosomal RNAXB [auth SB]160Triticum aestivum
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Entity ID: 77
MoleculeChains LengthOrganismImage
5S ribosomal RNAYB [auth TB]120Triticum aestivum
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Entity ID: 78
MoleculeChains LengthOrganismImage
mRNAZB [auth al]7Triticum aestivum
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Entity ID: 80
MoleculeChains LengthOrganismImage
tRNAiBC [auth cl]75Triticum aestivum
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Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
3HE
Query on 3HE

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BN [auth RB]4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione
C15 H23 N O4
YPHMISFOHDHNIV-FSZOTQKASA-N
ZN
Query on ZN

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GF [auth WA],
JF [auth GB],
XE [auth wa],
YE [auth db]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AD [auth aa]
AE [auth aa]
AF [auth DA]
AG [auth RB]
AH [auth RB]
AD [auth aa],
AE [auth aa],
AF [auth DA],
AG [auth RB],
AH [auth RB],
AI [auth RB],
AJ [auth RB],
AK [auth RB],
AL [auth RB],
AM [auth RB],
AN [auth RB],
BD [auth aa],
BE [auth aa],
BF [auth DA],
BG [auth RB],
BH [auth RB],
BI [auth RB],
BJ [auth RB],
BK [auth RB],
BL [auth RB],
BM [auth RB],
CC [auth aa],
CD [auth aa],
CE [auth aa],
CF [auth GA],
CG [auth RB],
CH [auth RB],
CI [auth RB],
CJ [auth RB],
CK [auth RB],
CL [auth RB],
CM [auth RB],
CN [auth TB],
DC [auth aa],
DD [auth aa],
DE [auth aa],
DF [auth HA],
DG [auth RB],
DH [auth RB],
DI [auth RB],
DJ [auth RB],
DK [auth RB],
DL [auth RB],
DM [auth RB],
DN [auth cl],
EC [auth aa],
ED [auth aa],
EE [auth aa],
EF [auth IA],
EG [auth RB],
EH [auth RB],
EI [auth RB],
EJ [auth RB],
EK [auth RB],
EL [auth RB],
EM [auth RB],
EN [auth cl],
FC [auth aa],
FD [auth aa],
FE [auth aa],
FF [auth JA],
FG [auth RB],
FH [auth RB],
FI [auth RB],
FJ [auth RB],
FK [auth RB],
FL [auth RB],
FM [auth RB],
GC [auth aa],
GD [auth aa],
GE [auth aa],
GG [auth RB],
GH [auth RB],
GI [auth RB],
GJ [auth RB],
GK [auth RB],
GL [auth RB],
GM [auth RB],
HC [auth aa],
HD [auth aa],
HE [auth aa],
HF [auth DB],
HG [auth RB],
HH [auth RB],
HI [auth RB],
HJ [auth RB],
HK [auth RB],
HL [auth RB],
HM [auth RB],
IC [auth aa],
ID [auth aa],
IE [auth aa],
IF [auth DB],
IG [auth RB],
IH [auth RB],
II [auth RB],
IJ [auth RB],
IK [auth RB],
IL [auth RB],
IM [auth RB],
JC [auth aa],
JD [auth aa],
JE [auth aa],
JG [auth RB],
JH [auth RB],
JI [auth RB],
JJ [auth RB],
JK [auth RB],
JL [auth RB],
JM [auth RB],
KC [auth aa],
KD [auth aa],
KE [auth aa],
KF [auth KB],
KG [auth RB],
KH [auth RB],
KI [auth RB],
KJ [auth RB],
KK [auth RB],
KL [auth RB],
KM [auth RB],
LC [auth aa],
LD [auth aa],
LE [auth aa],
LF [auth OB],
LG [auth RB],
LH [auth RB],
LI [auth RB],
LJ [auth RB],
LK [auth RB],
LL [auth RB],
LM [auth RB],
MC [auth aa],
MD [auth aa],
ME [auth aa],
MF [auth PB],
MG [auth RB],
MH [auth RB],
MI [auth RB],
MJ [auth RB],
MK [auth RB],
ML [auth RB],
MM [auth RB],
NC [auth aa],
ND [auth aa],
NE [auth aa],
NF [auth RB],
NG [auth RB],
NH [auth RB],
NI [auth RB],
NJ [auth RB],
NK [auth RB],
NL [auth RB],
NM [auth RB],
OC [auth aa],
OD [auth aa],
OE [auth aa],
OF [auth RB],
OG [auth RB],
OH [auth RB],
OI [auth RB],
OJ [auth RB],
OK [auth RB],
OL [auth RB],
OM [auth RB],
PC [auth aa],
PD [auth aa],
PE [auth aa],
PF [auth RB],
PG [auth RB],
PH [auth RB],
PI [auth RB],
PJ [auth RB],
PK [auth RB],
PL [auth RB],
PM [auth RB],
QC [auth aa],
QD [auth aa],
QE [auth aa],
QF [auth RB],
QG [auth RB],
QH [auth RB],
QI [auth RB],
QJ [auth RB],
QK [auth RB],
QL [auth RB],
QM [auth RB],
RC [auth aa],
RD [auth aa],
RE [auth aa],
RF [auth RB],
RG [auth RB],
RH [auth RB],
RI [auth RB],
RJ [auth RB],
RK [auth RB],
RL [auth RB],
RM [auth RB],
SC [auth aa],
SD [auth aa],
SE [auth aa],
SF [auth RB],
SG [auth RB],
SH [auth RB],
SI [auth RB],
SJ [auth RB],
SK [auth RB],
SL [auth RB],
SM [auth RB],
TC [auth aa],
TD [auth aa],
TE [auth aa],
TF [auth RB],
TG [auth RB],
TH [auth RB],
TI [auth RB],
TJ [auth RB],
TK [auth RB],
TL [auth RB],
TM [auth RB],
UC [auth aa],
UD [auth aa],
UE [auth aa],
UF [auth RB],
UG [auth RB],
UH [auth RB],
UI [auth RB],
UJ [auth RB],
UK [auth RB],
UL [auth RB],
UM [auth RB],
VC [auth aa],
VD [auth aa],
VE [auth aa],
VF [auth RB],
VG [auth RB],
VH [auth RB],
VI [auth RB],
VJ [auth RB],
VK [auth RB],
VL [auth RB],
VM [auth RB],
WC [auth aa],
WD [auth aa],
WE [auth aa],
WF [auth RB],
WG [auth RB],
WH [auth RB],
WI [auth RB],
WJ [auth RB],
WK [auth RB],
WL [auth RB],
WM [auth RB],
XC [auth aa],
XD [auth aa],
XF [auth RB],
XG [auth RB],
XH [auth RB],
XI [auth RB],
XJ [auth RB],
XK [auth RB],
XL [auth RB],
XM [auth RB],
YC [auth aa],
YD [auth aa],
YF [auth RB],
YG [auth RB],
YH [auth RB],
YI [auth RB],
YJ [auth RB],
YK [auth RB],
YL [auth RB],
YM [auth RB],
ZC [auth aa],
ZD [auth aa],
ZE [auth BA],
ZF [auth RB],
ZG [auth RB],
ZH [auth RB],
ZI [auth RB],
ZJ [auth RB],
ZK [auth RB],
ZL [auth RB],
ZM [auth RB]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
RECONSTRUCTIONRELION

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Japan Society for the Promotion of Science (JSPS)JapanJP19H05637

Revision History  (Full details and data files)

  • Version 1.0: 2024-02-21
    Type: Initial release
  • Version 1.1: 2024-05-15
    Changes: Database references