8FTE

CryoEM strucutre of 22-mer RBM2 of the Salmonella MS-ring


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

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Literature

CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation.

Singh, P.K.Cecchini, G.Nakagawa, T.Iverson, T.M.

(2023) PLoS One 18: e0285343-e0285343

  • DOI: https://doi.org/10.1371/journal.pone.0285343
  • Primary Citation of Related Structures:  
    8FTE, 8FTF

  • PubMed Abstract: 

    The flagellar motor supports bacterial chemotaxis, a process that allows bacteria to move in response to their environment. A central feature of this motor is the MS-ring, which is composed entirely of repeats of the FliF subunit. This MS-ring is critical for the assembly and stability of the flagellar switch and the entire flagellum. Despite multiple independent cryoEM structures of the MS-ring, there remains a debate about the stoichiometry and organization of the ring-building motifs (RBMs). Here, we report the cryoEM structure of a Salmonella MS-ring that was purified from the assembled flagellar switch complex (MSC-ring). We term this the 'post-assembly' state. Using 2D class averages, we show that under these conditions, the post-assembly MS-ring can contain 32, 33, or 34 FliF subunits, with 33 being the most common. RBM3 has a single location with C32, C33, or C34 symmetry. RBM2 is found in two locations with RBM2inner having C21 or C22 symmetry and an RBM2outer-RBM1 having C11 symmetry. Comparison to previously reported structures identifies several differences. Most strikingly, we find that the membrane domain forms 11 regions of discrete density at the base of the structure rather than a contiguous ring, although density could not be unambiguously interpreted. We further find density in some previously unresolved areas, and we assigned amino acids to those regions. Finally, we find differences in interdomain angles in RBM3 that affect the diameter of the ring. Together, these investigations support a model of the flagellum with structural plasticity, which may be important for flagellar assembly and function.


  • Organizational Affiliation

    Department of Pharmacology, Vanderbilt University, Nashville, TN, United States of America.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar M-ring protein560Salmonella enterica subsp. enterica serovar TyphimuriumMutation(s): 0 
Gene Names: fliFfla AII.1fla BISTM1969
UniProt
Find proteins for P15928 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Explore P15928 
Go to UniProtKB:  P15928
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP15928
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC4.0.1
MODEL REFINEMENTPHENIX1.20.1
MODEL REFINEMENTCoot0.9.8.4

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/John E. Fogarty International Center (NIH/FIC)United StatesGM61606

Revision History  (Full details and data files)

  • Version 1.0: 2023-05-31
    Type: Initial release