8DAQ

CryoEM structure of Western equine encephalitis virus VLP


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.35 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Alternate repeat domain usage in an alphavirus entry receptor enables host species expansion

Zimmerman, O.Zimmerman, M.I.Nelson, C.A.Raju, S.Errico, J.M.Madden, E.A.Hassan, A.O.VanBlargan, L.A.Kim, A.S.Adams, L.J.Basore, K.Whitener, B.M.Earnest, J.T.Holmes, A.C.Ebel, G.D.Zmasek, C.Scheuermann, R.H.Fremont, D.H.Diamond, M.S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
E1 envelope glycoprotein
A, C, E, G
438Western equine encephalitis virusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q1W679 (Western equine encephalitis virus)
Explore Q1W679 
Go to UniProtKB:  Q1W679
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ1W679
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
E2 envelope glycoprotein
B, D, F, H
415Western equine encephalitis virusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q1W679 (Western equine encephalitis virus)
Explore Q1W679 
Go to UniProtKB:  Q1W679
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ1W679
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.35 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesHHSN272201700060C

Revision History  (Full details and data files)

  • Version 1.0: 2023-12-20
    Type: Initial release