18mer DNA mimic Foldamer with an aliphatic linker in complex with Sac7d wild protein
Deepak, D., Corvaglia, V., Wu, J., Huc, I.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA-binding protein 7d | A [auth AA] | 66 | Sulfolobus acidocaldarius DSM 639 | Mutation(s): 0  Gene Names: Saci_0064 | |
UniProt | |||||
Find proteins for P13123 (Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)) Explore P13123  Go to UniProtKB:  P13123 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P13123 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
N-[2-(2-methyl-1,3-dioxolan-2-yl)phenyl]-2-{[5-(trifluoromethyl)pyridin-2-yl]amino}pyridine-4-carboxamide | 10 | synthetic construct | Mutation(s): 0  | ||
Sequence AnnotationsExpand | |||||
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Modified Residues 2 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
V4F Query on V4F | B, C | PEPTIDE LINKING | C12 H13 N2 O6 P | V4F | |
V53 Query on V53 | B, C | PEPTIDE LINKING | C11 H11 N2 O6 P | ES1 |
Length ( Å ) | Angle ( ˚ ) |
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a = 71.41 | α = 90 |
b = 71.41 | β = 90 |
c = 116.17 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
PHASER | phasing |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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European Research Council (ERC) | European Union | -- |