8CMN | pdb_00008cmn

18mer DNA mimic Foldamer with an aliphatic linker in complex with Sac7d wild protein

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth AA]SCOP2B SuperfamilyChromo domain-like 8034344 3000161 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AA]Spt4e8cmnAA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Spt4ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AA]PF022947kD DNA-binding domain (7kD_DNA_binding)7kD DNA-binding domainThis family contains members of the hyper-thermophilic archaebacterium 7kD DNA-binding/endoribonuclease P2 family. There are five 7kD DNA-binding proteins, 7a-7e, found as monomers in the cell. Protein 7e shows the tightest DNA-binding ability. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, C
N-[2-(2-methyl-1,3-dioxolan-2-yl)phenyl]-2-{[5-(trifluoromethyl)pyridin-2-yl]amino}pyridine-4-carboxamide---
A [auth AA]DNA-binding protein 7d -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth AA]IPR016197Chromo-like domain superfamilyHomologous Superfamily
A [auth AA]IPR003212DNA-binding protein 7a-eFamily