Download MendeleyCrystal structure of UGT708A6 with UDP
Fredslund, F., Bidart, G.N., Welner, D.H.To be published.
8CGQ
Crystal structure of UGT708A6 with UDP
- PDB DOI: https://doi.org/10.2210/pdb8CGQ/pdb
- Classification: TRANSFERASE
- Organism(s): Zea mays
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2023-02-06 Released: 2024-02-21
- Funding Organization(s): Novo Nordisk Foundation
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.04 Å
- R-Value Free: 0.227
- R-Value Work: 0.178
- R-Value Observed: 0.180
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| UDP-glycosyltransferase 708A6 | 476 | Zea mays | Mutation(s): 0 Gene Names: UGT708A6 EC: 2.4.1 |  | |
UniProt | |||||
Find proteins for A0A096SRM5 (Zea mays) Explore A0A096SRM5 Go to UniProtKB: A0A096SRM5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A096SRM5 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| UDP (Subject of Investigation/LOI) Query on UDP | C [auth A] | URIDINE-5'-DIPHOSPHATE C9 H14 N2 O12 P2 XCCTYIAWTASOJW-XVFCMESISA-N |  | ||
| CL (Subject of Investigation/LOI) Query on CL | B [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.04 Å
- R-Value Free: 0.227
- R-Value Work: 0.178
- R-Value Observed: 0.180
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 51.431 | α = 90 |
| b = 72.593 | β = 101.694 |
| c = 57.018 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-02-21 Deposition Author(s): Fredslund, F., Bidart, G.N., Welner, D.H.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Novo Nordisk Foundation | Denmark | NNF20CC0035580 |
Revision History (Full details and data files)
- Version 1.0: 2024-02-21
Type: Initial release
