8ZZJ | pdb_00008zzj

Multiple co-existing states of an RNA four-way junction resolved by FRET, SAXS, and integrative modeling: major state

Integrative structure models are generated using different types of input information, including varied experimental data, physical principles, statistical preferences, and other prior information.

• PDB DOI: https://doi.org/10.2210/pdb8ZZJ/pdb
• NAKB: 8ZZJ

• Mutation(s): No 


• Deposited: 2018-06-29 Released: 2022-06-17 
• Deposition Author(s): Hanke, C.A., Vardanyan, H., Sindbert, S., Kalinin, S., Barth, A., Dimura, M., Soltysinski, T., Lach, G., Springstubbe, D., Apel, B., Snell, E., Grant, T.D., Lipfert, J., Mueller, S., Bujnicki, J.M., Gohlke, H., Seidel, C.A.M.

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Integrative Structure Snapshot

• Multi-Scale: No 
• Multi-State: Yes 
• Ordered-State: No 
• Deposited Models: 10 
• Representative Model: 1 

Literature

Multiple co-existing structures of an RNA four-way junction resolved by FRET, SAXS, and integrative modeling

Hanke, C.A., Vardanyan, H., Sindbert, S., Kalinin, S., Barth, A., Dimura, M., Soltysinski, T., Lach, G., Springstubbe, D., Apel, B., Snell, E., Grant, T.D., Lipfert, J., Mueller, S., Bujnicki, J.M., Gohlke, H., Seidel, C.A.M.

Assembly  

Macromolecule Content 

• Total Structure Weight: 46.97 kDa 
• Atom Count: 2,929 
• Modeled Residue Count: 138 
• Deposited Residue Count: 138 
• Unique nucleic acid chains: 4

Macromolecules

Entity ID: 1
Molecule	Chains	Length	Organism	Image
RNA (37-MER) - strand a	A	37	N/A

Entity ID: 2
Molecule	Chains	Length	Organism	Image
RNA (37-MER) - strand b	B	37	N/A

Entity ID: 3
Molecule	Chains	Length	Organism	Image
RNA (32-MER) - strand c	C	32	N/A

Entity ID: 4
Molecule	Chains	Length	Organism	Image
RNA (32-MER) - strand d	D	32	N/A

Experimental Data & Validation

Integrative Structure Snapshot

• Multi-Scale: No 
• Multi-State: Yes 
• Ordered-State: No 
• Deposited Models: 10 
• Representative Model: 1 

Structure Validation

View Full Validation Report

View Summary Validation Report

Entry History 

Deposition Data

• Released Date: 2022-06-17 
Deposition Author(s): Hanke, C.A., Vardanyan, H., Sindbert, S., Kalinin, S., Barth, A., Dimura, M., Soltysinski, T., Lach, G., Springstubbe, D., Apel, B., Snell, E., Grant, T.D., Lipfert, J., Mueller, S., Bujnicki, J.M., Gohlke, H., Seidel, C.A.M.

Revision History  

• Version 1.0: 2022-06-17
  Type: Initial release