8ZQ7 | pdb_00008zq7

Crystal structure of prefusion RSV F protein

• PDB DOI: https://doi.org/10.2210/pdb8ZQ7/pdb

• Classification: VIRAL PROTEIN
• Organism(s): human respiratory syncytial virus, Enterobacteria phage T6
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2024-06-01 Released: 2025-06-04 
• Deposition Author(s): Huang, Q., Lang, Q., Han, X., Yan, J.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.77 Å
• R-Value Free: 
  0.242 (Depositor), 0.241 (DCC) 
• R-Value Work: 
  0.207 (Depositor), 0.206 (DCC) 
• R-Value Observed: 
  0.208 (Depositor) 

Starting Model: integrative

Literature

preF8P of RSV glycoprotein F0

Huang, Q., Lang, Q., Han, X., Yan, J.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 343.77 kDa 
• Atom Count: 21,095 
• Modeled Residue Count: 2,742 
• Deposited Residue Count: 3,132 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fusion glycoprotein F0,Fibritin	A, B, C, D, E, F	522	human respiratory syncytial virus, Enterobacteria phage T6	Mutation(s): 0
UniProt
Find proteins for A0A346FJN8 (Enterobacteria phage T6) Explore A0A346FJN8  Go to UniProtKB:  A0A346FJN8
Find proteins for P12568 (Human respiratory syncytial virus) Explore P12568  Go to UniProtKB:  P12568
UniProt Groups	P12568A0A346FJN8

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.77 Å
• R-Value Free:  0.242 (Depositor), 0.241 (DCC) 
• R-Value Work:  0.207 (Depositor), 0.206 (DCC) 
• R-Value Observed: 0.208 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 158.423	α = 90
b = 168.696	β = 90
c = 190.683	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data scaling
XDS	data reduction
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-06-04 
Deposition Author(s): Huang, Q., Lang, Q., Han, X., Yan, J.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2025-06-04
  Type: Initial release